Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14b13
         (507 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               25   0.60 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   5.6  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    21   7.3  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    21   9.7  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    21   9.7  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    21   9.7  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   9.7  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   9.7  

>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 24.6 bits (51), Expect = 0.60
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 106 KYYKNLGCLIKNAKRKKHLVEHEQ 177
           KY  N  C I  A  K H++++++
Sbjct: 70  KYLTNYSCFITCALEKSHIIQNDE 93


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 34  IKKPINMPNYSYTPTIGR 87
           +++P   PNYS   TIG+
Sbjct: 509 VRQPGKAPNYSVNWTIGQ 526


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +1

Query: 364 DSFPIVNDQEVMDVYLVANLKPTRPNRCYKFLAQHALRWEEDYVP 498
           +SF I++    + +  +A L           L ++  +WEE Y+P
Sbjct: 194 ESFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYIP 238


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 76  TIGRTYVYDNKYYKNLGC 129
           ++   Y Y+N  YK L C
Sbjct: 84  SLSNNYNYNNNNYKKLYC 101


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 76  TIGRTYVYDNKYYKNLGC 129
           ++   Y Y+N  YK L C
Sbjct: 84  SLSNNYNYNNNNYKKLYC 101


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 76  TIGRTYVYDNKYYKNLGC 129
           ++   Y Y+N  YK L C
Sbjct: 84  SLSNNYNYNNNNYKKLYC 101


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +1

Query: 199 LDNYMVAEDPFLGPGK 246
           LD Y    DPF  P K
Sbjct: 142 LDRYWAITDPFTYPSK 157


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 316 WSGKEFLRETWT 351
           WS K FLR  W+
Sbjct: 157 WSRKGFLRTRWS 168


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,412
Number of Sequences: 438
Number of extensions: 3449
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)