Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14a23
(570 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 27 0.099
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 27 0.099
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 26 0.30
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 24 0.92
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 23 1.6
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 23 1.6
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.8
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 22 3.7
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 8.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 8.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 8.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 8.6
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 27.5 bits (58), Expect = 0.099
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 299 IVGRPFNLNCTLA-VPLDSFEIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDD 475
+ G L C +A P++ EI W++ + L + R ++ G T I + D
Sbjct: 531 VAGETLRLKCPVAGYPIE--EIKWERANRELPDDL----RQKVLPDG-TLVITSVQKKGD 583
Query: 476 YGNYTCGLKNQTGH 517
G YTC +N+ GH
Sbjct: 584 AGVYTCSARNKQGH 597
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 473 DYGNYTCGLKNQTGHIK 523
D G+YTC ++N G+ K
Sbjct: 1378 DGGDYTCQVENAQGNDK 1394
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 27.5 bits (58), Expect = 0.099
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 299 IVGRPFNLNCTLA-VPLDSFEIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDD 475
+ G L C +A P++ EI W++ + L + R ++ G T I + D
Sbjct: 531 VAGETLRLKCPVAGYPIE--EIKWERANRELPDDL----RQKVLPDG-TLVITSVQKKGD 583
Query: 476 YGNYTCGLKNQTGH 517
G YTC +N+ GH
Sbjct: 584 AGVYTCSARNKQGH 597
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 473 DYGNYTCGLKNQTGHIK 523
D G+YTC ++N G+ K
Sbjct: 1374 DGGDYTCQVENAQGNDK 1390
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 25.8 bits (54), Expect = 0.30
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +2
Query: 332 LAVPLDSFEIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQT 511
LAV + + E+ WK G V +R +G F IK + D G Y+C ++N
Sbjct: 1299 LAVGVPAPEVTWKVR----GAVLQSSDRLRQLPEGSLF-IK-EVDRTDAGEYSCYVENTF 1352
Query: 512 GH 517
GH
Sbjct: 1353 GH 1354
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 24.2 bits (50), Expect = 0.92
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 296 YIVGRPFNLNCTL 334
YI G PFN NC++
Sbjct: 676 YIGGNPFNCNCSM 688
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 490 VRPQEPNGTYQSLDGHGKRARQDDQG 567
+RP +G YQ+L H K+ R+ G
Sbjct: 32 LRPNFLDGWYQTLQTHMKKVREQMAG 57
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 256 RAHPRTGQL*GLEVHRWTPVQFEL 327
R P + L LEV RW P++ L
Sbjct: 112 RTEPLSPHLLNLEVERWRPLRSRL 135
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 22.6 bits (46), Expect = 2.8
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = -1
Query: 396 TSPRGTLFFFHTISNESSGTARVQFKLNGRPTMYFKAS*LTSSWVGSVTG 247
TS R +F+ S+E+S A +FK + F + W+ S G
Sbjct: 23 TSHRPAWWFWTATSHEASAPAEGKFKTVSKVPGPFSLPIFGTRWIFSCIG 72
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 22.2 bits (45), Expect = 3.7
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +1
Query: 217 YECPKLVNDCSGHRAHPRTGQL*GLEVHRWTPV 315
+EC K N C HR R L + +W+ +
Sbjct: 98 FECSKTSNPCLPHRNSDR-----DLNIRKWSSI 125
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +1
Query: 388 RRGGRPQGAVRAPEQGAHLPDQGP 459
R GG P GA P + + GP
Sbjct: 409 REGGPPTGATTGPNEIVTCTNCGP 432
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +1
Query: 388 RRGGRPQGAVRAPEQGAHLPDQGP 459
R GG P GA P + + GP
Sbjct: 395 REGGPPTGATTGPNEIVTCTNCGP 418
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +1
Query: 388 RRGGRPQGAVRAPEQGAHLPDQGP 459
R GG P GA P + + GP
Sbjct: 429 REGGPPTGATTGPNEIVTCTNCGP 452
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +1
Query: 388 RRGGRPQGAVRAPEQGAHLPDQGP 459
R GG P GA P + + GP
Sbjct: 378 REGGPPTGATTGPNEIVTCTNCGP 401
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,014
Number of Sequences: 438
Number of extensions: 3439
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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