Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13p14
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     69   1e-13
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    27   0.40 
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    27   0.71 
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    25   2.2  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   3.8  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   6.6  
AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding pr...    23   8.7  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   8.7  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 69.3 bits (162), Expect = 1e-13
 Identities = 30/43 (69%), Positives = 37/43 (86%)
 Frame = -2

Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
           MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 43



 Score = 69.3 bits (162), Expect = 1e-13
 Identities = 30/43 (69%), Positives = 37/43 (86%)
 Frame = -2

Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
           MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119



 Score = 69.3 bits (162), Expect = 1e-13
 Identities = 30/43 (69%), Positives = 37/43 (86%)
 Frame = -2

Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
           MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 27.5 bits (58), Expect = 0.40
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
 Frame = +1

Query: 166 VNVPLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQADVQEAIDAFKRLNITPGHL 345
           V +PL     EL   + +   R+I L+R+    P +K       EA +AF +  IT GH+
Sbjct: 665 VRLPLKAER-ELGESKEVALRRLIGLERRFEREPKVK-------EAYEAFMQEYITLGHM 716

Query: 346 GEVIDAMGQQGRLLPEIIEADDDFKVNQTRNL---SCKT 453
               +     G  +P       D    + R +   SCKT
Sbjct: 717 SVRENENSSDGYYMPHHAVFKQDSTTTKCRVVFDGSCKT 755


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 26.6 bits (56), Expect = 0.71
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 123 YSSKH*RAKPLPP-KRNPQRRWPISSKKLP 37
           Y + H   + +PP +RNP+RR P S  + P
Sbjct: 240 YKNAHASIRKIPPSRRNPRRRSPRSGGRWP 269


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 145 SNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVD 14
           + +VK    ++T+  + I  ETE A+   DL+ +I   EG  V+
Sbjct: 339 AGNVKSLGQMETVEIRFIDEETEAADVERDLRNQITGLEGYKVE 382


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +3

Query: 282 SGRRARSDRCFQTT*YNTGPLGRGDRC 362
           +GR      C Q   Y TGPL   + C
Sbjct: 678 AGRCNEFKHCVQCQQYKTGPLAEANEC 704


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 539 KSHHSQSACV*QSRQRNNLSF 477
           K HH +S  V   +Q+N++SF
Sbjct: 845 KKHHKRSKRVKDGKQQNHVSF 865


>AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding
           protein OBPjj5c protein.
          Length = 155

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 178 LPPPMVELCNRRPIPT 225
           LP  ++E C  RP+P+
Sbjct: 5   LPEQVIETCRARPLPS 20


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 459 FDSFAAEIARLIHFKIVVSFYNFW 388
           F +F A +A+ + ++    +YN W
Sbjct: 589 FSTFHASLAKPVGWRPTFKYYNMW 612


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,581
Number of Sequences: 2352
Number of extensions: 16209
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)