Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13p07
         (687 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   1.6  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    24   1.6  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    24   1.6  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   3.6  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -3

Query: 415 NEYLCCDKCLFPIIDYLEKRRQLTPRQQLYMFVFLSICY 299
           N+Y+  D    PI+++L++      R  LY+ + +++ Y
Sbjct: 23  NDYIL-DNYTSPIVEFLQQEDSSIRRDPLYIVLPITVIY 60


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 415 NEYLCCDKCLFPIIDYLEKRRQLTPRQQ 332
           N Y  CD CL  I+D  ++   +  R++
Sbjct: 103 NVYCKCDDCLLGIVDDYQRNPSVVGRKK 130


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 533 FIFVICTTLVRVRVFLISFDK 595
           FIF+   +LVR R F I  DK
Sbjct: 22  FIFLYFNSLVRFRRFTIELDK 42


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 384 NKHLSQHKYSLIVTTDRHIRQNASQF 461
           N+ L+ + +   + TD H++ NAS+F
Sbjct: 49  NQILTTNCWVTQIWTDHHLKWNASEF 74


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,003
Number of Sequences: 438
Number of extensions: 4218
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)