Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt15c19
         (641 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110913-1|AAI10914.1|  806|Homo sapiens valosin-containing prot...   282   6e-76
AL353795-2|CAH70993.1|  806|Homo sapiens valosin-containing prot...   282   6e-76
AF100752-1|AAD43016.1|  806|Homo sapiens transitional endoplasmi...   282   6e-76
AC004472-1|AAC07984.1|  806|Homo sapiens TERA_HUMAN protein.          282   6e-76
BC121794-1|AAI21795.1|  806|Homo sapiens valosin-containing prot...   279   5e-75
AF313485-1|AAG29873.1|  307|Homo sapiens valosin-containing prot...   190   5e-48
BC007562-1|AAH07562.2|  644|Homo sapiens VCP protein protein.          40   0.006

>BC110913-1|AAI10914.1|  806|Homo sapiens valosin-containing protein
           protein.
          Length = 806

 Score =  282 bits (692), Expect = 6e-76
 Identities = 130/176 (73%), Positives = 152/176 (86%)
 Frame = +1

Query: 112 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 291
           AD+K  DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5   ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63

Query: 292 RKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSV 471
           R+E VCIVLSDD C DEKIRM             DV+SI PCP VKYGKR+H+LPIDD+V
Sbjct: 64  RREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTV 123

Query: 472 EGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPD 639
           EG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPD
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179


>AL353795-2|CAH70993.1|  806|Homo sapiens valosin-containing protein
           protein.
          Length = 806

 Score =  282 bits (692), Expect = 6e-76
 Identities = 130/176 (73%), Positives = 152/176 (86%)
 Frame = +1

Query: 112 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 291
           AD+K  DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5   ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63

Query: 292 RKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSV 471
           R+E VCIVLSDD C DEKIRM             DV+SI PCP VKYGKR+H+LPIDD+V
Sbjct: 64  RREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTV 123

Query: 472 EGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPD 639
           EG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPD
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179


>AF100752-1|AAD43016.1|  806|Homo sapiens transitional endoplasmic
           reticulum ATPase protein.
          Length = 806

 Score =  282 bits (692), Expect = 6e-76
 Identities = 130/176 (73%), Positives = 152/176 (86%)
 Frame = +1

Query: 112 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 291
           AD+K  DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5   ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63

Query: 292 RKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSV 471
           R+E VCIVLSDD C DEKIRM             DV+SI PCP VKYGKR+H+LPIDD+V
Sbjct: 64  RREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTV 123

Query: 472 EGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPD 639
           EG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPD
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179


>AC004472-1|AAC07984.1|  806|Homo sapiens TERA_HUMAN protein.
          Length = 806

 Score =  282 bits (692), Expect = 6e-76
 Identities = 130/176 (73%), Positives = 152/176 (86%)
 Frame = +1

Query: 112 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 291
           AD+K  DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5   ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63

Query: 292 RKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSV 471
           R+E VCIVLSDD C DEKIRM             DV+SI PCP VKYGKR+H+LPIDD+V
Sbjct: 64  RREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTV 123

Query: 472 EGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPD 639
           EG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPD
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179


>BC121794-1|AAI21795.1|  806|Homo sapiens valosin-containing protein
           protein.
          Length = 806

 Score =  279 bits (685), Expect = 5e-75
 Identities = 129/176 (73%), Positives = 151/176 (85%)
 Frame = +1

Query: 112 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 291
           AD+K  DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5   ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63

Query: 292 RKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSV 471
           R+E VCIVLSDD C DEKIRM             DV+SI PCP VKYGKR+H+LPIDD+V
Sbjct: 64  RREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTV 123

Query: 472 EGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPD 639
           EG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRAVEFKVVET PSP+CIVAPD
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETHPSPYCIVAPD 179


>AF313485-1|AAG29873.1|  307|Homo sapiens valosin-containing protein
           protein.
          Length = 307

 Score =  190 bits (462), Expect = 5e-48
 Identities = 84/115 (73%), Positives = 94/115 (81%)
 Frame = +1

Query: 295 KETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVE 474
           +E VCIVLSDD C DEKIRM             DV+SI PCP VKYGKR+H+LPIDD+VE
Sbjct: 3   REAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVE 62

Query: 475 GLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPD 639
           G+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPD
Sbjct: 63  GITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 117


>BC007562-1|AAH07562.2|  644|Homo sapiens VCP protein protein.
          Length = 644

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +1

Query: 589 FKVVETDPSPFCIVAPD 639
           FKVVETDPSP+CIVAPD
Sbjct: 1   FKVVETDPSPYCIVAPD 17


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,289,538
Number of Sequences: 237096
Number of extensions: 1966340
Number of successful extensions: 3937
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3937
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)