Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt14o08
(504 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 36 0.005
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 33 0.024
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 33 0.032
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 32 0.056
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 31 0.074
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.23
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 30 0.23
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 30 0.23
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce... 28 0.69
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 28 0.92
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 28 0.92
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 1.6
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 2.1
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 25 4.9
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 25 6.5
SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 6.5
SPCC11E10.02c |gpi8||pig-K|Schizosaccharomyces pombe|chr 3|||Manual 25 8.5
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 35.5 bits (78), Expect = 0.005
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 388 ARALYDNIAESPDELAFRRGDLLTVLEQNTGGSEGW 495
ARA+Y E P +L+F++GD++ ++E++ + W
Sbjct: 376 ARAMYSFAGEQPGDLSFQKGDIIDIVERSGSHDDWW 411
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 33.1 bits (72), Expect = 0.024
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 376 TQCMARALYDNIAESPDELAFRRGDLLTVLE 468
T RALYD A EL+F++GD++ VLE
Sbjct: 216 TVSRVRALYDFAATEQGELSFKKGDIILVLE 246
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 32.7 bits (71), Expect = 0.032
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 394 ALYDNIAESPDELAFRRGDLLTVLEQNTGG 483
ALYD A+ P+E++F++GD L VL G
Sbjct: 873 ALYDYQAQIPEEISFQKGDTLMVLRTQEDG 902
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 31.9 bits (69), Expect = 0.056
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 394 ALYDNIAESPDELAFRRGDLLTVLE 468
ALYD A P+E++FR+GD + VL+
Sbjct: 614 ALYDYDAAIPEEISFRKGDTIAVLK 638
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 31.5 bits (68), Expect = 0.074
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = -2
Query: 245 TPRRFAQQKITFPQ---KLFSTTLKSFATIERDY--DAQRKFNIFLINLMKTQKLNSLNS 81
TP R+ F Q +LFS L R + A +KF + LI LM NSL S
Sbjct: 761 TPLRWVFTTFQFRQDTYRLFSAVLSQGYECSRAFVDSANQKFLLRLIKLMDQLMSNSLVS 820
Query: 80 NAATYKKRD 54
AAT K D
Sbjct: 821 GAATLVKND 829
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.9 bits (64), Expect = 0.23
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 379 QCMARALYDNIAESPDELAFRRGDLLTVLEQNTGGSEGW 495
Q M LYD IAE+ DEL + ++ V+ +T S+ W
Sbjct: 510 QKMGTVLYDFIAEAADELTV-KANMRVVIVNDTASSDWW 547
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 29.9 bits (64), Expect = 0.23
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 391 RALYDNIAESPDELAFRRGDLLTVLEQNTGGSEGW 495
+ALY A+S EL+ + GD++ V +N G GW
Sbjct: 590 KALYAYTAQSDMELSIQEGDIIQVTNRNAG--NGW 622
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 29.9 bits (64), Expect = 0.23
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 394 ALYDNIAESPDELAFRRGDLLTVLEQNTGGSEGW 495
ALYD A++ +L+F GD + V+ + +E W
Sbjct: 414 ALYDYAAQAAGDLSFHAGDRIEVVSRTDNQNEWW 447
>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 28.3 bits (60), Expect = 0.69
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 364 TVLPTQCMARALYDNIAESPDELAFRRGDLLTVL 465
++ P + + RALYD A E++F +GD V+
Sbjct: 21 SIEPPRKVIRALYDYTARKATEVSFAKGDFFHVI 54
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.9 bits (59), Expect = 0.92
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = -2
Query: 227 QQKITFPQKLFSTTLKSFATIERDYDAQRKFNIFLINLMKTQKLNSLNSNAATYKKRDKI 48
Q+KI F KL + +++E+D +A K L +KT K + + + + ++K
Sbjct: 868 QEKINFGNKLAKEHTEKISSLEKDLEAATKTASTLSKELKTVKSENDSLKSVSNDDQNKE 927
Query: 47 ETTN 36
++ N
Sbjct: 928 KSVN 931
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 27.9 bits (59), Expect = 0.92
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 382 CMARALYDNIAESPDELAFRRGDLLTVLEQNTG 480
CM RALY E +L F GDL+ L G
Sbjct: 9 CMVRALYAWPGEREGDLKFTEGDLIECLSIGDG 41
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.1 bits (57), Expect = 1.6
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -2
Query: 491 PSLPPVFCSSTVSRSPLRKASSSGDSAMLSYKARAIHCVGSTVSRPRG 348
P++PP SST + P SS+G S+ + + C ST P G
Sbjct: 303 PTVPPTSTSSTSTPPPPASTSSTGTSSS-PLPSTSTSCTTSTSIPPTG 349
Score = 26.6 bits (56), Expect = 2.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -2
Query: 491 PSLPPVFCSSTVSRSPLRKASSSGDSAMLSYKARAIHCVGSTVSRPRG 348
P++PP SST + P SS+G S+ + + C ST P G
Sbjct: 357 PTVPPTSTSSTSTPPPPASTSSTGTSSS-PLLSTSTSCTTSTSIPPTG 403
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 2.1
Identities = 8/30 (26%), Positives = 19/30 (63%)
Frame = +1
Query: 394 ALYDNIAESPDELAFRRGDLLTVLEQNTGG 483
ALYD SP+E+ ++ +++ ++++ G
Sbjct: 1113 ALYDFAGRSPNEMTIKKDEIIEIVQKEPSG 1142
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 25.4 bits (53), Expect = 4.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 467 SSTVSRSPLRKASSSGDSAMLSYKARAIHCVGSTVS 360
SS+ S S SSSG S ++ ++++H GS+ S
Sbjct: 543 SSSSSSSRSGSTSSSGSSHTITSTSQSVHTSGSSTS 578
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 25.0 bits (52), Expect = 6.5
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = -2
Query: 494 QPSLPPVFCSSTVSRSPLRKASSSGDSAMLSYKARAIHCVGSTV 363
+PS P F ++ + +P+ ++ + ML+Y R + G V
Sbjct: 394 KPSSPDSFTNANPTTAPIVSRNAQDNMGMLAYMIRMVSIWGRVV 437
>SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 673
Score = 25.0 bits (52), Expect = 6.5
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 383 VWRVLCMITLRSLRTS*LFEEATCSPCWSKTPVAARAGGC 502
VW+VLC F+ A C C + PVAAR C
Sbjct: 200 VWQVLCSSD---------FQLAACPFCLEEKPVAARMSRC 230
>SPCC11E10.02c |gpi8||pig-K|Schizosaccharomyces pombe|chr 3|||Manual
Length = 380
Score = 24.6 bits (51), Expect = 8.5
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 34 QFVVSILSRFLYVAAFELSEFNFW-VFIKLMRKILNFR 144
QFV +L L + A E S N W V I R N+R
Sbjct: 4 QFVALLLLNLLQIIAAESSHTNNWAVLISTSRFWFNYR 41
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,881,866
Number of Sequences: 5004
Number of extensions: 32337
Number of successful extensions: 96
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 200198394
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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