Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10g23
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    26   0.36 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    26   0.36 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   1.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   1.9  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    23   3.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.4  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +2

Query: 443 QLFIEHSEALEINQKLQDT--INTFSQCSDEFCDSLKITAE 559
           QLF+EH E   IN++  DT  + T +   ++ C  +K+T +
Sbjct: 234 QLFLEHYEV--INRQTLDTADVKTLTTVVEKECYKMKVTID 272


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +2

Query: 443 QLFIEHSEALEINQKLQDT--INTFSQCSDEFCDSLKITAE 559
           QLF+EH E   IN++  DT  + T +   ++ C  +K+T +
Sbjct: 160 QLFLEHYEV--INRQTLDTADVKTLTTVVEKECYKMKVTID 198


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 566 HKLAEADDCISDLRSELCKLKEQQP 640
           HKLAEA D   ++   +  L+E+ P
Sbjct: 564 HKLAEASDKDPEMYDRVVALREKNP 588


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 17/61 (27%), Positives = 31/61 (50%)
 Frame = +2

Query: 491 QDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKLKEQQPQSLYSELVQS 670
           Q+T+ +  Q   +  DSLK   E+  KL   D  +S L  ++ ++ +   ++ Y E V+ 
Sbjct: 353 QETLKSQVQRESDVVDSLKDVIEIVDKLLNPDLGLSLL--QVAQIFKNLLENHYEEFVRY 410

Query: 671 E 673
           E
Sbjct: 411 E 411


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +3

Query: 609 QSYVNLRNSSLRAYIRNWFRAN 674
           +SY+   ++S+R+++ NW  AN
Sbjct: 197 RSYIPPLSTSMRSHLCNWGSAN 218


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +3

Query: 609 QSYVNLRNSSLRAYIRNWFRAN 674
           +SY+   ++S+R+++ NW  AN
Sbjct: 357 RSYIPPLSTSMRSHLCNWGSAN 378


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +3

Query: 609 QSYVNLRNSSLRAYIRNWFRAN 674
           +SY+   ++S+R+++ NW  AN
Sbjct: 357 RSYIPPLSTSMRSHLCNWGSAN 378


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,108
Number of Sequences: 336
Number of extensions: 2569
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)