Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10g22
(742 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative ... 168 3e-42
At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative ... 165 3e-41
At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative ... 161 4e-40
At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative ... 161 4e-40
At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative ... 161 4e-40
At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative ... 161 6e-40
At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative ... 62 5e-10
At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 / 3-keto... 59 3e-09
At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 / 3-keto... 59 3e-09
At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative ... 58 6e-09
At2g04540.1 68415.m00460 3-oxoacyl-[acyl-carrier-protein] syntha... 30 1.9
At3g53680.1 68416.m05928 PHD finger transcription factor, putati... 29 3.2
At5g48120.1 68418.m05944 expressed protein low similarity to MMS... 29 4.3
At4g24970.1 68417.m03578 ATP-binding region, ATPase-like domain-... 29 4.3
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 28 5.7
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 28 5.7
At2g34710.1 68415.m04263 homeobox-leucine zipper transcription f... 28 7.5
At3g46570.1 68416.m05055 glycosyl hydrolase family 17 protein si... 27 9.9
>At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 403
Score = 168 bits (409), Expect = 3e-42
Identities = 87/179 (48%), Positives = 113/179 (63%), Gaps = 2/179 (1%)
Frame = +3
Query: 120 MAAFSTKVSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEV 299
MA S V+ +V I RTPM + AA++RA + ++EV
Sbjct: 1 MAHTSESVNPRDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEV 60
Query: 300 YIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIIL 479
GNV SANLGQAPARQA + AG+P S ICTTVNKVCASGMK++M+AAQ +Q G D+++
Sbjct: 61 VFGNVLSANLGQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVV 120
Query: 480 AGGMESMSNVPFYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKNYKL 650
AGGMESMSN P YL R + +G LVDG++ DGL DVYN MG+CAE A+ +++
Sbjct: 121 AGGMESMSNTPKYLAEARKGSRFGHDSLVDGMLKDGLWDVYNDCGMGSCAELCAEKFQI 179
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2
Query: 632 SKKLQITRXDQDEYAVNSYKRSAAAYEAKAFVDELVP 742
++K QITR QD+YAV S++R AA EA AF E+VP
Sbjct: 174 AEKFQITREQQDDYAVQSFERGIAAQEAGAFTWEIVP 210
>At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 398
Score = 165 bits (401), Expect = 3e-41
Identities = 84/172 (48%), Positives = 110/172 (63%), Gaps = 2/172 (1%)
Frame = +3
Query: 141 VSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCS 320
V ++V I RTPM + AA++RA + ++EV GNV S
Sbjct: 3 VDESDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVFGNVLS 62
Query: 321 ANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESM 500
ANLGQAPARQA + AG+P S ICTTVNKVCASGMK++M+AAQ +Q G D+++AGGMESM
Sbjct: 63 ANLGQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVVAGGMESM 122
Query: 501 SNVPFYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKNYKL 650
SN P YL R + +G LVDG++ DGL DVYN MG+CAE A+ +++
Sbjct: 123 SNTPKYLAEARKGSRFGHDSLVDGMLKDGLWDVYNDCGMGSCAELCAEKFQI 174
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2
Query: 632 SKKLQITRXDQDEYAVNSYKRSAAAYEAKAFVDELVP 742
++K QITR QD+YAV S++R AA EA AF E+VP
Sbjct: 169 AEKFQITREQQDDYAVQSFERGIAAQEAGAFTWEIVP 205
>At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 161 bits (391), Expect = 4e-40
Identities = 81/168 (48%), Positives = 107/168 (63%), Gaps = 2/168 (1%)
Frame = +3
Query: 153 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 332
+V + RTP+ + AA++RA + ++EV+ GNV +ANLG
Sbjct: 14 DVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTANLG 73
Query: 333 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 512
QAPARQA + AG+P S ICTT+NKVCA+GMKS+MLA+Q +Q G DI++AGGMESMSNVP
Sbjct: 74 QAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVP 133
Query: 513 FYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKNYKL 650
YL R + G +VDG++ DGL DVYN F MG C E A Y++
Sbjct: 134 KYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRI 181
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 611 GKLC*KHSKKLQITRXDQDEYAVNSYKRSAAAYEAKAFVDELVP 742
G++C + + +ITR +QD YA+ S++R AA + F E+VP
Sbjct: 172 GEIC---ADQYRITREEQDAYAIQSFERGIAAQNTQLFAWEIVP 212
>At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 415
Score = 161 bits (391), Expect = 4e-40
Identities = 81/168 (48%), Positives = 107/168 (63%), Gaps = 2/168 (1%)
Frame = +3
Query: 153 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 332
+V + RTP+ + AA++RA + ++EV+ GNV +ANLG
Sbjct: 14 DVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTANLG 73
Query: 333 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 512
QAPARQA + AG+P S ICTT+NKVCA+GMKS+MLA+Q +Q G DI++AGGMESMSNVP
Sbjct: 74 QAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVP 133
Query: 513 FYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKNYKL 650
YL R + G +VDG++ DGL DVYN F MG C E A Y++
Sbjct: 134 KYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRI 181
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 611 GKLC*KHSKKLQITRXDQDEYAVNSYKRSAAAYEAKAFVDELVP 742
G++C + + +ITR +QD YA+ S++R AA + F E+VP
Sbjct: 172 GEIC---ADQYRITREEQDAYAIQSFERGIAAQNTQLFAWEIVP 212
>At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 161 bits (391), Expect = 4e-40
Identities = 81/168 (48%), Positives = 107/168 (63%), Gaps = 2/168 (1%)
Frame = +3
Query: 153 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 332
+V + RTP+ + AA++RA + ++EV+ GNV +ANLG
Sbjct: 14 DVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTANLG 73
Query: 333 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 512
QAPARQA + AG+P S ICTT+NKVCA+GMKS+MLA+Q +Q G DI++AGGMESMSNVP
Sbjct: 74 QAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVP 133
Query: 513 FYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKNYKL 650
YL R + G +VDG++ DGL DVYN F MG C E A Y++
Sbjct: 134 KYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRI 181
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 611 GKLC*KHSKKLQITRXDQDEYAVNSYKRSAAAYEAKAFVDELVP 742
G++C + + +ITR +QD YA+ S++R AA + F E+VP
Sbjct: 172 GEIC---ADQYRITREEQDAYAIQSFERGIAAQNTQLFAWEIVP 212
>At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 406
Score = 161 bits (390), Expect = 6e-40
Identities = 81/169 (47%), Positives = 107/169 (63%), Gaps = 3/169 (1%)
Frame = +3
Query: 153 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 332
+V + RTP+ + AA++RA + ++EV+ GNV +ANLG
Sbjct: 14 DVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTANLG 73
Query: 333 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 512
QAPARQA + AG+P S ICTT+NKVCA+GMKS+MLA+Q +Q G DI++AGGMESMSNVP
Sbjct: 74 QAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVP 133
Query: 513 FYL---KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKNYKL 650
YL R + G +VDG++ DGL DVYN F MG C E A Y++
Sbjct: 134 KYLPDASRRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRI 182
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 611 GKLC*KHSKKLQITRXDQDEYAVNSYKRSAAAYEAKAFVDELVP 742
G++C + + +ITR +QD YA+ S++R AA + F E+VP
Sbjct: 173 GEIC---ADQYRITREEQDAYAIQSFERGIAAQNTQLFAWEIVP 213
>At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 462
Score = 61.7 bits (143), Expect = 5e-10
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Frame = +3
Query: 150 NEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXV-NAAIERAGIPKEEIKEVYIGNVCSAN 326
++VVI +A RTP+ V A IE+ + E+ ++ +G V +
Sbjct: 50 DDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPG 109
Query: 327 LGQAP-ARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 503
+A R A +AG P++ TVN+ C+SG++++ A ++ G DI + G+ESM+
Sbjct: 110 SQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
Query: 504 NVP 512
P
Sbjct: 170 TNP 172
Score = 36.3 bits (80), Expect = 0.021
Identities = 14/37 (37%), Positives = 28/37 (75%)
Frame = +2
Query: 632 SKKLQITRXDQDEYAVNSYKRSAAAYEAKAFVDELVP 742
+++ ++R +QD+ AV+S++++AAA A F DE++P
Sbjct: 204 AQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
>At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 457
Score = 58.8 bits (136), Expect = 3e-09
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +3
Query: 150 NEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXV-NAAIERAGIPKEEIKEVYIGNVCSAN 326
+++VI +A RT + V A +ER + E+ ++ +G V +
Sbjct: 49 DDIVIVAAYRTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPG 108
Query: 327 LGQA-PARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 503
+A R A FAG P S TVN+ C+SG++++ A ++ G DI + G+ESMS
Sbjct: 109 SQRAMECRVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMS 168
Score = 35.1 bits (77), Expect = 0.049
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 632 SKKLQITRXDQDEYAVNSYKRSAAAYEAKAFVDELVP 742
+++ +TR +QD AV S+KR+AAA + DE++P
Sbjct: 205 AERFGVTREEQDMAAVESHKRAAAAIASGKLKDEIIP 241
>At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 414
Score = 58.8 bits (136), Expect = 3e-09
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +3
Query: 150 NEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXV-NAAIERAGIPKEEIKEVYIGNVCSAN 326
+++VI +A RT + V A +ER + E+ ++ +G V +
Sbjct: 6 DDIVIVAAYRTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPG 65
Query: 327 LGQA-PARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 503
+A R A FAG P S TVN+ C+SG++++ A ++ G DI + G+ESMS
Sbjct: 66 SQRAMECRVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMS 125
Score = 35.1 bits (77), Expect = 0.049
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 632 SKKLQITRXDQDEYAVNSYKRSAAAYEAKAFVDELVP 742
+++ +TR +QD AV S+KR+AAA + DE++P
Sbjct: 162 AERFGVTREEQDMAAVESHKRAAAAIASGKLKDEIIP 198
>At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 443
Score = 58.0 bits (134), Expect = 6e-09
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Frame = +3
Query: 150 NEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXV-NAAIERAGIPKEEIKEVYIGNVCSAN 326
++VVI +A RT + V A IE+ + E+ ++ +G V
Sbjct: 42 DDVVIVAAQRTALCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVGTVLGPG 101
Query: 327 LGQAP-ARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 503
+A R A +AG P++ TVN+ C+SG++++ A ++ G DI + G+ESM+
Sbjct: 102 SQRASECRMAAFYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 161
Query: 504 NVP 512
P
Sbjct: 162 TNP 164
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +2
Query: 581 AHRCVQQISHGKLC*KHSKKLQITRXDQDEYAVNSYKRSAAAYEAKAFVDELVP 742
AH C+ + G + + ++R +QD+ AV+S++++A+A + F DE+ P
Sbjct: 181 AHNCL--LPMGITSENVAHRFNVSREEQDQAAVDSHRKAASATASGKFKDEITP 232
>At2g04540.1 68415.m00460 3-oxoacyl-[acyl-carrier-protein] synthase
II, putative similar to Swiss-Prot:P56902
3-oxoacyl-[acyl-carrier-protein] synthase II (EC
2.3.1.41) (Beta- ketoacyl-ACP synthase II) (KAS II)
[Rhizobium meliloti]
Length = 461
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 408 CASGMKSIMLAAQGLQTGAQDIILAGGMES 497
CA+G SI A + +Q G D+++AGG ES
Sbjct: 209 CATGAHSIGDATRMIQFGDADVMVAGGTES 238
>At3g53680.1 68416.m05928 PHD finger transcription factor, putative
predicted proteins, Arabidopsis thaliana
Length = 839
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 305 WQCLFCKFGPSTCKTSCNICRFAKKYHMYNCKQSMCLWHEIYNVG--STRSTNWS 463
W C C GP TSC I + Y +N ++ + H Y++ S RS ++S
Sbjct: 523 WYCSSCNDGP----TSCKIATASWLYTYFNLNANILVLHSAYSLSPISDRSHDFS 573
>At5g48120.1 68418.m05944 expressed protein low similarity to MMS19
[Mus musculus] GI:14029390
Length = 1152
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +3
Query: 366 GLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYG 545
GLP I ++VC++G K + QGL+ + +ES FYL+ G
Sbjct: 605 GLPYQMILEATSEVCSTGPKYVEKMVQGLEEAFCSSLSDFYIESFLVSNFYLETTCQVNG 664
Query: 546 GMQLVD 563
+ +D
Sbjct: 665 NFESID 670
>At4g24970.1 68417.m03578 ATP-binding region, ATPase-like
domain-containing protein low similarity to microrchidia
[Mus musculus] GI:5410255; contains Pfam profile
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein
Length = 707
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 477 LAGGMESMSNVPFYLKRGETSYGGMQLVD 563
+AGG+E + N LKRG ++GG VD
Sbjct: 44 VAGGLEKVGNNFVGLKRGRDTFGGSSEVD 72
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = -1
Query: 580 PSNTIPSTNC-IPPYEVSP 527
PS+T PS+NC PPY+ SP
Sbjct: 49 PSHTPPSSNCGSPPYDPSP 67
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = -1
Query: 580 PSNTIPSTNC-IPPYEVSP 527
PS+T PS+NC PPY+ SP
Sbjct: 49 PSHTPPSSNCGSPPYDPSP 67
>At2g34710.1 68415.m04263 homeobox-leucine zipper transcription
factor (HB-14) identical to homeodomain transcription
factor (ATHB-14)GP:3132474 GB:Y11122 [Arabidopsis
thaliana];
Length = 852
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 458 WSPRYNTCWWDGIYVKC 508
W+ RY+TC DG YV C
Sbjct: 284 WTLRYSTCLEDGSYVVC 300
>At3g46570.1 68416.m05055 glycosyl hydrolase family 17 protein
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 356
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -1
Query: 253 ALTATAPNSDADKLDKL--PRKEPIGVLTADAITTSLRETLVENAAIAVN 110
+LT T PNSD L KL R L +TTS+R V N +A +
Sbjct: 77 SLTVTVPNSDIISLSKLSNARSWLSDNLLPFLLTTSIRYIAVGNEVVATS 126
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,428,246
Number of Sequences: 28952
Number of extensions: 297754
Number of successful extensions: 795
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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