Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10g17
         (453 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024253-1|ABC86315.1|   71|Drosophila melanogaster IP15859p pro...    56   3e-08
AE014296-3727|AAO41288.1|   98|Drosophila melanogaster CG33170-P...    51   6e-07
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    30   1.7  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    30   1.7  
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ...    28   5.1  

>BT024253-1|ABC86315.1|   71|Drosophila melanogaster IP15859p
           protein.
          Length = 71

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 25/54 (46%), Positives = 37/54 (68%)
 Frame = +2

Query: 170 MFKGLIIFGAGVYTGVYVAQNYQIEKVEDPKALFEKAQAFVKSKLSEVQDGKKD 331
           M K L+ FGAGVYTG+YV+QNY++ +V+DP+ L ++       KL E+ D  K+
Sbjct: 1   MLKFLLTFGAGVYTGIYVSQNYEVPRVDDPQKLMQR----FNEKLKELMDQTKN 50


>AE014296-3727|AAO41288.1|   98|Drosophila melanogaster CG33170-PA
           protein.
          Length = 98

 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 22/49 (44%), Positives = 34/49 (69%)
 Frame = +2

Query: 185 IIFGAGVYTGVYVAQNYQIEKVEDPKALFEKAQAFVKSKLSEVQDGKKD 331
           + FGAGVYTG+YV+QNY++ +V+DP+ L ++       KL E+ D  K+
Sbjct: 53  LTFGAGVYTGIYVSQNYEVPRVDDPQKLMQR----FNEKLKELMDQTKN 97


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 200 GVYTGVYVAQNYQIEKVEDPKALFEKA 280
           G+ + +Y+AQN +IEK E P  +F  A
Sbjct: 267 GIASDIYIAQNRRIEKTEAPGKVFAAA 293


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 200 GVYTGVYVAQNYQIEKVEDPKALFEKA 280
           G+ + +Y+AQN +IEK E P  +F  A
Sbjct: 265 GIASDIYIAQNRRIEKTEAPGKVFAAA 291


>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
           protein.
          Length = 1037

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +2

Query: 11  YVGTL*FMLKNKLLIISNNIGKHLQYMSIGSNSCLSQ 121
           Y G    +  + +LI S NIG+H+ ++S    SCLS+
Sbjct: 281 YTGQFCIVYMDDILIFSKNIGEHVNHLSC-IFSCLSK 316


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,564,666
Number of Sequences: 53049
Number of extensions: 221489
Number of successful extensions: 464
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1476622287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)