Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10g05
         (399 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132949-12|CAB70105.1|   90|Caenorhabditis elegans Hypothetical...    50   5e-07
Z93383-6|CAB07623.1|  283|Caenorhabditis elegans Hypothetical pr...    30   0.70 
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p...    30   0.70 
Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical pr...    28   2.1  
Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical pr...    28   2.1  
Z74038-2|CAE48502.1|  611|Caenorhabditis elegans Hypothetical pr...    28   2.1  
Z81137-3|CAB03471.1|  338|Caenorhabditis elegans Hypothetical pr...    28   2.8  
AF016435-4|AAB65880.2|  330|Caenorhabditis elegans Serpentine re...    28   2.8  
Z50872-2|CAA90755.1|  273|Caenorhabditis elegans Hypothetical pr...    27   3.7  
AF000262-9|AAN60529.1|  820|Caenorhabditis elegans Hypothetical ...    27   3.7  
Z48009-5|CAA88086.1|  329|Caenorhabditis elegans Hypothetical pr...    27   5.0  
AF026215-7|ABR92608.1|  554|Caenorhabditis elegans Hypothetical ...    27   5.0  
AF026215-6|AAB71325.1|  516|Caenorhabditis elegans Hypothetical ...    27   5.0  
Z78061-1|CAB01494.1|  658|Caenorhabditis elegans Hypothetical pr...    27   6.5  
U64857-12|AAN84849.1|  413|Caenorhabditis elegans Hypothetical p...    26   8.7  
U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical pr...    26   8.7  
AC024877-9|AAF60900.2|  214|Caenorhabditis elegans Hypothetical ...    26   8.7  

>AL132949-12|CAB70105.1|   90|Caenorhabditis elegans Hypothetical
           protein Y53F4B.14 protein.
          Length = 90

 Score = 50.4 bits (115), Expect = 5e-07
 Identities = 23/68 (33%), Positives = 39/68 (57%)
 Frame = +3

Query: 105 MGNWKLEVGRMAMYTSFPVGLFFFFNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQD 284
           MG WKLE GR  +  +FPVG F+ FNQP  F+E++   +       ++   E  ++L+  
Sbjct: 1   MGGWKLETGRFLLLITFPVGAFWLFNQPTIFKEFMRGYRIPDSSAGDKAMAEFKEQLLAT 60

Query: 285 MRKKQMQS 308
            RK++ ++
Sbjct: 61  KRKEEYEN 68


>Z93383-6|CAB07623.1|  283|Caenorhabditis elegans Hypothetical
           protein F54B8.6 protein.
          Length = 283

 Score = 29.9 bits (64), Expect = 0.70
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = -1

Query: 315 IPDFAFVSSSYPVLIFESLLYHVGFLV--GRFVFLYLLPILQNI 190
           + + AF+   YP L+F+++ Y +GFL+   RF+ +Y  P+   I
Sbjct: 77  VKNLAFILI-YPFLVFDTMRYTLGFLITFDRFIAIY-FPVFYQI 118


>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
           protein C52B9.8 protein.
          Length = 1336

 Score = 29.9 bits (64), Expect = 0.70
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +3

Query: 189 KYFEEWVTNTKRQIFPPENQHDREAIQKLIQDMRKKQMQSLESK 320
           K  ++++TN  ++I   E ++++  IQKLIQ+  +     L+ K
Sbjct: 218 KSMQQYITNENKRIAREEMKNEKNRIQKLIQEDEEGYRAMLDEK 261


>Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical
           protein H40L08.3 protein.
          Length = 1026

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 10/48 (20%), Positives = 25/48 (52%)
 Frame = +3

Query: 177 FNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQDMRKKQMQSLESK 320
           FN+ +  ++   +  + ++  E+ H +   + +I+D  +K  + LE K
Sbjct: 747 FNESEAIKQRTISNLKGLYEDESTHQKRKYETMIEDQIRKSFRQLEEK 794


>Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical
           protein H40L08.3 protein.
          Length = 1026

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 10/48 (20%), Positives = 25/48 (52%)
 Frame = +3

Query: 177 FNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQDMRKKQMQSLESK 320
           FN+ +  ++   +  + ++  E+ H +   + +I+D  +K  + LE K
Sbjct: 747 FNESEAIKQRTISNLKGLYEDESTHQKRKYETMIEDQIRKSFRQLEEK 794


>Z74038-2|CAE48502.1|  611|Caenorhabditis elegans Hypothetical
           protein F58B4.1b protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 156 PVGLFFFFNQPKYFEEWVTNTKRQIFPPENQHDRE 260
           P G  FF N    F  W TN  +  +P  N ++ +
Sbjct: 571 PFGSNFFNNNYNSFNNWYTNKNKNYYPYSNSNNNK 605


>Z81137-3|CAB03471.1|  338|Caenorhabditis elegans Hypothetical
           protein W02D9.4 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -3

Query: 154 NDVYIAILPTSSFQLPIV*KF-IFRFSELRLLYLDFSLINILSQFI 20
           N +YI  LP S+    +   + ++ F+ L LL L    IN+LSQ I
Sbjct: 230 NIIYIRFLPDSNSTFFVFSCYSLYLFTNLLLLNLKLLFINVLSQVI 275


>AF016435-4|AAB65880.2|  330|Caenorhabditis elegans Serpentine
           receptor, class w protein8 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 134 DGYVHIISCWIVLFFQPTKIF*RMGNKYKKTNLPTRKPT 250
           DGY+ ++ C++ +    T IF     K ++ NL   K T
Sbjct: 222 DGYIAMVVCFLYIIVAGTLIFQLQKAKQRRKNLKAEKST 260


>Z50872-2|CAA90755.1|  273|Caenorhabditis elegans Hypothetical
           protein C05D12.4 protein.
          Length = 273

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 135 MAMYTSFPVGLFFFFNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQDMRKKQ-MQSL 311
           + M T++ +  F F +     E WVTN K  +   +++   E ++K    ++ KQ  Q L
Sbjct: 196 LKMQTNW-IDTFLFEHSKMISEVWVTNQKMAVQSKQSEDQLEVLKKKKDVLKAKQAAQEL 254

Query: 312 E 314
           E
Sbjct: 255 E 255


>AF000262-9|AAN60529.1|  820|Caenorhabditis elegans Hypothetical
           protein C48E7.8 protein.
          Length = 820

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 160 LDCSFFSTNQNILKNG*QIQKDKSSHQKTNMIEKRFKN 273
           + CSF  + + IL+     + DK +H K N  ++ FKN
Sbjct: 18  VSCSFTKSGKQILQQ--IFEGDKDNHTKFNKFQELFKN 53


>Z48009-5|CAA88086.1|  329|Caenorhabditis elegans Hypothetical
           protein AH6.7 protein.
          Length = 329

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -1

Query: 327 WFTWIPDFAFVSSSYPVLIFESLLY 253
           W  W+    F+++S+P+L+   + Y
Sbjct: 274 WVVWVYTIPFIAASFPILLIYRIRY 298


>AF026215-7|ABR92608.1|  554|Caenorhabditis elegans Hypothetical
           protein F09G2.8b protein.
          Length = 554

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +3

Query: 198 EEWVTNTKRQIFPPENQHDREAIQKLIQDMRK 293
           E +++++     P   +HD  AIQK+++D RK
Sbjct: 365 EYFISSSPGPFNPKGREHDLAAIQKIMKDARK 396


>AF026215-6|AAB71325.1|  516|Caenorhabditis elegans Hypothetical
           protein F09G2.8 protein.
          Length = 516

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +3

Query: 198 EEWVTNTKRQIFPPENQHDREAIQKLIQDMRK 293
           E +++++     P   +HD  AIQK+++D RK
Sbjct: 327 EYFISSSPGPFNPKGREHDLAAIQKIMKDARK 358


>Z78061-1|CAB01494.1|  658|Caenorhabditis elegans Hypothetical
           protein C48G7.1 protein.
          Length = 658

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +3

Query: 234 PPENQHDREAIQKLIQDMRKKQMQS 308
           PP N  D +  Q  ++++R+K++QS
Sbjct: 454 PPANAGDPQVQQNCVEELRRKRLQS 478


>U64857-12|AAN84849.1|  413|Caenorhabditis elegans Hypothetical
           protein C37C3.2c protein.
          Length = 413

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 242 FWWEDLSFCICYPFFKIFWLVEKKEQ 165
           F W    FC+  P F+   L+ KK Q
Sbjct: 379 FTWATYVFCVFLPIFEPIQLISKKPQ 404


>U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical
           protein F23F12.3 protein.
          Length = 522

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 269 LNRFSIMLVFWWEDLSFCICYPFFKIFW 186
           +NRF I+  F W+   F  C   F IF+
Sbjct: 6   INRFHILCFFLWQFGLFYACQLIFPIFY 33


>AC024877-9|AAF60900.2|  214|Caenorhabditis elegans Hypothetical
           protein Y95B8A.4 protein.
          Length = 214

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 154 FLLDCSFFSTNQNILKNG*QIQKDKSSHQKTNMIEKRFK 270
           FL    +F    + +KNG Q Q+   + +KT   EK+ K
Sbjct: 176 FLFFFKYFKKFNSTVKNGDQKQESDETDEKTEKTEKQAK 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,416,449
Number of Sequences: 27780
Number of extensions: 204746
Number of successful extensions: 562
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)