Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10f17
         (402 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   2.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   4.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.0  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -3

Query: 280 LQIFIKFVEAVYHRAKVFLNSLRGQGGFNFFPQFLNCFLRTL 155
           L IF   +E V      FL ++ GQG FN      N  L T+
Sbjct: 247 LVIFDCCLETVSALNGAFLYTINGQGQFNIEMFLCNMSLLTV 288


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 197 ESALAPETVKKNFGTMVDSFN 259
           +  LA  T+K+NF T ++  N
Sbjct: 686 DELLAQPTIKENFHTALEIMN 706


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 125  KEDNSLNTLAESAKKTIEELREKVES 202
            K DN  N      ++++ +L  K+ES
Sbjct: 1093 KADNKENEQLRKIQESLRDLNRKIES 1118


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 125  KEDNSLNTLAESAKKTIEELREKVES 202
            K DN  N      ++++ +L  K+ES
Sbjct: 1093 KADNKENEQLRKIQESLRDLNRKIES 1118


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -2

Query: 392  HRKLLFNNVENIITFDIFGVMYLDTKKLLLRLSVLPR 282
            HRK +   ++ I+ FDI     ++ KK   +  V+ R
Sbjct: 1179 HRKKIVKFLDGIMAFDIQLKQVVNYKKKKFQRMVVAR 1215


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,414
Number of Sequences: 336
Number of extensions: 1847
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)