Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10d04
         (361 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   0.95 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   2.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   5.1  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    20   8.8  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 0.95
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +2

Query: 5   FIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTST 127
           F++  FI +L+T   I+Y+++ +    F  T  +F   TST
Sbjct: 145 FVFCYFI-YLFTVYYIYYSVHEASIINFGYTLAKFMIFTST 184


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +2

Query: 32  LYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYF 157
           ++   + FY I  S YN+  TTF  F +N ++   +  +I+F
Sbjct: 242 IFMTTTSFYRILNSGYNL--TTFGSFIFNANS--AIEGIIFF 279


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 53  FYNIYWSKYNIFSTTFFRFSWNTSTIFRLSR 145
           FY IY   YNI + +   +    +T  R+++
Sbjct: 39  FYKIYKYTYNIVAVSLTAYMVYITTNLRITQ 69


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 334 SSLYECSAGGKF 299
           SSLY C AG +F
Sbjct: 241 SSLYTCIAGYEF 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,968
Number of Sequences: 336
Number of extensions: 1364
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)