Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0984
(691 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 36 0.031
SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34) 35 0.054
SB_13936| Best HMM Match : ABC_tran (HMM E-Value=4.6e-14) 34 0.12
SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14) 31 0.67
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 31 0.67
SB_40911| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_2154| Best HMM Match : LRR_1 (HMM E-Value=4.9e-06) 31 1.2
SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14) 30 2.0
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_32803| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 29 3.6
SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_49488| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27) 28 8.2
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = +3
Query: 324 ITAIDLSNKGISELTHNYTLPEXXXXXXXXXXXXKEVPSEVLKLTKLKTFNVSHNSITYF 503
+T + + +SEL+ ++TL + + +P + L KL+ N+S N+I
Sbjct: 135 LTELRIDENDLSELSVSFTLMKNLKVLELGDNHIERLPEDFGNLRKLEVVNLSQNNIEKL 194
Query: 504 DDAPDFCNTIEQLNISNNALEGPP 575
++ F ++ +I+ N +E P
Sbjct: 195 PESFGFLCCLKSFDITGNHIENLP 218
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/108 (18%), Positives = 44/108 (40%)
Frame = +3
Query: 258 TDKKCKKNGLTKPITTLEWAKDITAIDLSNKGISELTHNYTLPEXXXXXXXXXXXXKEVP 437
T+ + +N L++ + K++ ++L + I L ++ +++P
Sbjct: 136 TELRIDENDLSELSVSFTLMKNLKVLELGDNHIERLPEDFGNLRKLEVVNLSQNNIEKLP 195
Query: 438 SEVLKLTKLKTFNVSHNSITYFDDAPDFCNTIEQLNISNNALEGPPYW 581
L LK+F+++ N I + + +E L NN + P W
Sbjct: 196 ESFGFLCCLKSFDITGNHIENLPERFESACFLEHLYADNNNITWLPDW 243
>SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34)
Length = 409
Score = 35.1 bits (77), Expect = 0.054
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 432 VPSEVLKLTKLKTFNVSHNSITYFDDAPDFCNTIEQLNISNNALEGPPY 578
VP++V + L+ N+S N+IT D + +LN++ N ++ PY
Sbjct: 234 VPAQVYGIQSLEILNISSNNITSLSDEIRLLRNLVELNLNKNNIQELPY 282
>SB_13936| Best HMM Match : ABC_tran (HMM E-Value=4.6e-14)
Length = 441
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +3
Query: 120 TRFSYQINQ*KKRQKKYD-IKHLIISTTKFGFVFQGKLINLRSQMDKTDKKCKKNGLTKP 296
TR + NQ K+ ++ D IKH+ +FG KL +K K K NGLT
Sbjct: 202 TREELEENQMKQYNREQDQIKHMKEYIARFGHG-SAKLARQAQSKEKVLAKMKANGLTDK 260
Query: 297 ITTLEWAKDITAIDLS 344
+ + +DI +D+S
Sbjct: 261 VVKDKHLQDILELDMS 276
>SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14)
Length = 384
Score = 31.5 bits (68), Expect = 0.67
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 426 KEVPSEVLKLTKLKTFNVSHNSITYFDDAPDFCNTIEQLNISNNALEGPP 575
+E+P L +L+ ++SHN + + + ++ +N+S N LE P
Sbjct: 120 RELPDTFCYLARLQKLDLSHNQLLHLPENIGLMESLLSINVSYNELEALP 169
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 426 KEVPSEVLKLTKLKTFNVSHNSITYFDDAPDFCNTIEQLNISNNALEGPPYWI 584
KE+P L L +++TF + + +AP C T ++ NA E P W+
Sbjct: 956 KEIP---LWLKRVRTFEAPKDEPSTKSEAPRLCGTPSNIDRDKNASENIPLWL 1005
>SB_40911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 31.1 bits (67), Expect = 0.88
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 450 KLTKLKTFNVSHNSITYFDDAPDFCNTIEQLNISNNALEGPP 575
KLT+L+ N+S NSIT + + ++ LNIS N ++ P
Sbjct: 148 KLTQLRELNLSRNSITKLEGLESLVH-LQVLNISRNQIQTLP 188
>SB_2154| Best HMM Match : LRR_1 (HMM E-Value=4.9e-06)
Length = 150
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 468 TFNVSHNSITYFDDAPDFCNTIEQLNISNNALEGPPYWIWSNTP 599
+ ++S N + F D +E LN++NN + P N+P
Sbjct: 50 SLDLSENKLVSFPDLQGLAENVENLNLANNEITSIPEGFLENSP 93
>SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 432 VPSEVLKLTKLKTFNVSHNSITYFDDAPDFCNTIEQL---NISNNALEGPPYWI 584
+P E+ L LK ++HN + +D P + QL NIS NA+E P ++
Sbjct: 84 LPDELGNLVNLKRLGLAHNKL---NDVPLYFGKFRQLEWLNISGNAIEVVPVFL 134
>SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14)
Length = 829
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/116 (17%), Positives = 42/116 (36%)
Frame = +3
Query: 240 RSQMDKTDKKCKKNGLTKPITTLEWAKDITAIDLSNKGISELTHNYTLPEXXXXXXXXXX 419
++ D+ K G+ K + +E K +T + N+ +
Sbjct: 473 KTNKDRELKLTSLEGVPKSLFEMEQLKSLTLSGCDLTMLDFDCTNWAKHKSLISLSLENC 532
Query: 420 XXKEVPSEVLKLTKLKTFNVSHNSITYFDDAPDFCNTIEQLNISNNALEGPPYWIW 587
+P V L L+ ++++N +T + LN+ NN + P ++W
Sbjct: 533 NLTSIPDVVFHLESLEKLDLNNNKLTSIPAGITNLTKLTNLNLENNNISVVPKYVW 588
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 426 KEVPSEVLKLTKLKTFNVSHNSITYFDDAP--DFCNTIEQLNISNNALEGPP 575
+++PS +LK+T LK ++S N +T D P ++ ++ L +S N LE P
Sbjct: 407 RKIPSGLLKMTCLKYLDLSDNELT---DLPRKEWSPVLKTLYLSGNLLETLP 455
>SB_32803| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 237 LRSQMDKTDKKCKKNGLTKPITTLEWAKDITAIDLSNKGI 356
+R Q++ + +K G+ PIT EWA + + + GI
Sbjct: 82 IRHQVETELENLEKQGIISPITNSEWATPVVPVVKKSGGI 121
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = +3
Query: 426 KEVPSEVLKLTKLKTFNVSHNSITYFDDAPDFCNTIEQLNISNNALEGPP 575
+ +P ++ LT+L+ ++HN + + N ++ L + N L PP
Sbjct: 491 ESLPDQMGSLTELEVLELTHNKLEKLSASLGLLNKLKCLKFAKNRLRFPP 540
>SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/54 (24%), Positives = 26/54 (48%)
Frame = +3
Query: 426 KEVPSEVLKLTKLKTFNVSHNSITYFDDAPDFCNTIEQLNISNNALEGPPYWIW 587
+ +P +LK + LK ++S N I + + +E LN+++N + W
Sbjct: 475 ESIPDAILKQSSLKKLDLSRNRIKSIPAQIEELSNLETLNLASNKITSGQEHTW 528
>SB_49488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1228
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 237 LRSQMDKTDKKCKKNGLTKPITTLEWAKDITAIDLSNKGI 356
+R Q++ + +K G+ PIT EWA + + + GI
Sbjct: 411 IRHQVETELENLEKQGIISPITNSEWATPVVPLVKKSGGI 450
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 237 LRSQMDKTDKKCKKNGLTKPITTLEWAKDITAIDLSNKGI 356
+R Q++ + +K G+ PIT EWA + + + GI
Sbjct: 894 IRHQVETELENLEKQGIISPITNSEWATPVVPLVKKSGGI 933
>SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27)
Length = 309
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 432 VPSEVLKLTKLKTFNVSHNSITYFDDAPDFCNTI--EQLNISNNALEGPP 575
+PS +LT LK +SHN++ Y A + C + E+L I N L P
Sbjct: 106 LPSGFGRLTNLKVLCLSHNNLGYL--ASEICELVQLEELWIINTQLMALP 153
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,853,728
Number of Sequences: 59808
Number of extensions: 347545
Number of successful extensions: 953
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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