Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0980
(730 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g22940.1 68417.m03312 protein kinase family protein contains ... 30 1.4
At1g03740.1 68414.m00354 protein kinase family protein contains ... 29 2.4
At5g45370.3 68418.m05573 nodulin-related / integral membrane fam... 28 5.5
At5g45370.2 68418.m05572 nodulin-related / integral membrane fam... 28 5.5
At5g45370.1 68418.m05571 nodulin-related / integral membrane fam... 28 5.5
At5g57930.2 68418.m07247 expressed protein 27 9.6
At5g57930.1 68418.m07246 expressed protein 27 9.6
At4g19185.1 68417.m02831 integral membrane family protein contai... 27 9.6
At3g45850.1 68416.m04962 kinesin motor protein-related kinesin-r... 27 9.6
At1g56520.1 68414.m06499 disease resistance protein (TIR-NBS-LRR... 27 9.6
At1g06750.1 68414.m00717 hypothetical protein 27 9.6
>At4g22940.1 68417.m03312 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 458
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -3
Query: 482 ILLYRRTDKHPNEFRILCNLLIGTTSLCLFLVFLLCMSDILGNSSI 345
I++ R+ D HPN ++ +L+ S L+L+F D+LG SS+
Sbjct: 151 IIILRKLD-HPNVIKLEGLMLVDHDSSTLYLIFEYMEHDLLGLSSL 195
>At1g03740.1 68414.m00354 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 542
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = -3
Query: 482 ILLYRRTDKHPNEFRILCNLLIGTTSLCLFLVFLLCMSDILGNSSICLRTYIKFSKMYWD 303
I++ RR D HPN + L L+ S L+LVF D+LG SS+ +KF++
Sbjct: 261 IIVMRRLD-HPNVLK-LEGLITAPVSSSLYLVFEYMDHDLLGLSSL---PGVKFTEPQVK 315
Query: 302 GIVRTLIS 279
+R L+S
Sbjct: 316 CYMRQLLS 323
>At5g45370.3 68418.m05573 nodulin-related / integral membrane family
protein contains Pfam profile:PF00892 integral membrane
protein DUF6
Length = 321
Score = 28.3 bits (60), Expect = 5.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 100 LTNADTARLVYFSYFHSVMSYGILLWGN 183
LT ++ +++ F S ++YG+L W N
Sbjct: 208 LTQSEVLAVIFAGVFASALNYGLLTWSN 235
>At5g45370.2 68418.m05572 nodulin-related / integral membrane family
protein contains Pfam profile:PF00892 integral membrane
protein DUF6
Length = 381
Score = 28.3 bits (60), Expect = 5.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 100 LTNADTARLVYFSYFHSVMSYGILLWGN 183
LT ++ +++ F S ++YG+L W N
Sbjct: 268 LTQSEVLAVIFAGVFASALNYGLLTWSN 295
>At5g45370.1 68418.m05571 nodulin-related / integral membrane family
protein contains Pfam profile:PF00892 integral membrane
protein DUF6
Length = 357
Score = 28.3 bits (60), Expect = 5.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 100 LTNADTARLVYFSYFHSVMSYGILLWGN 183
LT ++ +++ F S ++YG+L W N
Sbjct: 244 LTQSEVLAVIFAGVFASALNYGLLTWSN 271
>At5g57930.2 68418.m07247 expressed protein
Length = 443
Score = 27.5 bits (58), Expect = 9.6
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Frame = +1
Query: 211 LQKRAIRAIYNMHSRESLREKFKEIKVLTMPSQYIFENL--MYVRKHIEEFP-KMSDIHN 381
LQ +I ++SR L ++ + + ++ + E+L Y R+ + FP + D+
Sbjct: 48 LQGSSIEFSLQLNSRVVLSKERRSLPLVVRNDRPQNEDLPKQYTRREKKPFPVPIVDLRR 107
Query: 382 ------RNTRNKHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHL 543
+N ++K K +P + + S L+ ++YN + + NL HR K ++ +
Sbjct: 108 AARERVKNNKDKPKRPLPPPKNGMVVKSLVPLAYKVYNARIRLINNL--HRLMKVVRVNA 165
Query: 544 C 546
C
Sbjct: 166 C 166
>At5g57930.1 68418.m07246 expressed protein
Length = 440
Score = 27.5 bits (58), Expect = 9.6
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Frame = +1
Query: 211 LQKRAIRAIYNMHSRESLREKFKEIKVLTMPSQYIFENL--MYVRKHIEEFP-KMSDIHN 381
LQ +I ++SR L ++ + + ++ + E+L Y R+ + FP + D+
Sbjct: 45 LQGSSIEFSLQLNSRVVLSKERRSLPLVVRNDRPQNEDLPKQYTRREKKPFPVPIVDLRR 104
Query: 382 ------RNTRNKHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHL 543
+N ++K K +P + + S L+ ++YN + + NL HR K ++ +
Sbjct: 105 AARERVKNNKDKPKRPLPPPKNGMVVKSLVPLAYKVYNARIRLINNL--HRLMKVVRVNA 162
Query: 544 C 546
C
Sbjct: 163 C 163
>At4g19185.1 68417.m02831 integral membrane family protein contains
Pfam profile:PF00892 integral membrane protein DUF6
Length = 398
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 100 LTNADTARLVYFSYFHSVMSYGILLWGN 183
LT ++ ++Y S ++YG+L W N
Sbjct: 269 LTQSEVLAVIYAGVIASALNYGLLTWSN 296
>At3g45850.1 68416.m04962 kinesin motor protein-related
kinesin-related protein TKRP125, Nicotiana tabacum,
PIR:T02017
Length = 1058
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/89 (20%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +1
Query: 247 HSRESLREKFKEIKVLTMPSQYIFENLMYVRKHIEE--FPKMSDIHNRNTRNKHKLVVPM 420
HS L EK+++ +++ NL+ K + E F +++ + ++ + L +
Sbjct: 497 HSLFDLEEKYRQANATIKEKEFVISNLLKSEKSLVERAFQLRTELESASS-DVSNLFSKI 555
Query: 421 SRLHKIRNSFGCLSVRLYNKIPQDVQNLH 507
R KI + L + +++ Q ++ LH
Sbjct: 556 ERKDKIEDGNRFLIQKFQSQLTQQLELLH 584
>At1g56520.1 68414.m06499 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 897
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 461 LCACTTKSHKMFRTYIYIGLRKLLKNICAIKLTIKSM 571
L C+ ++ K F T++ +GLRKL + C I+ S+
Sbjct: 744 LYICSNRNLKTFSTHLPMGLRKLDLSNCGIEWVTDSI 780
>At1g06750.1 68414.m00717 hypothetical protein
Length = 495
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 622 NSRSEQLIPTLCNLLDNH*LYSKLYCTDVL 533
+ R + PT C+L+DN ++LYCT+ L
Sbjct: 377 HKRFAEAFPTYCSLVDN----ARLYCTNAL 402
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,833,294
Number of Sequences: 28952
Number of extensions: 275329
Number of successful extensions: 639
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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