Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0973
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   0.87 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    24   1.5  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.6  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 10/52 (19%), Positives = 27/52 (51%)
 Frame = +2

Query: 245 VFQAQYEPVETEFVNEVAIHGDFVKDVAFQVENLDYILEYARKQGAKVVKDL 400
           +  +Q  P+E   +  +   G +  D  +  E++  +L YA+ +G +++ ++
Sbjct: 253 ITDSQSFPLELPQLPNMTKFGAYSSDKIYHPEDITNLLGYAKLRGVRIIIEI 304


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 280 FCFHRLILRLKHEDYLIHSDGMRRNLSRTRLQTAVSQWL 164
           FCF   ++RLK ED    +   R  L   R+Q   +QW+
Sbjct: 190 FCFFVRVIRLKIEDL---NGAFRAGLE--RVQNGENQWI 223


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 610 NGG-SRFVVRKMPPFHRFWSVDDK 678
           NG  S  +V  +P F R W++DD+
Sbjct: 286 NGAPSAKIVLGLPTFGRAWAMDDE 309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,263
Number of Sequences: 336
Number of extensions: 4831
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)