Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0966
         (836 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   9.1  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -2

Query: 247 NFGSGPL*IVVFASPTLYSSFKEITFVNVGKVNTVFSGS 131
           NFG      ++F S  +Y++   I   +  K+N + SG+
Sbjct: 170 NFGYTLAKFMIFTSTCIYTNLLRIIEADFSKLNHLLSGT 208


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
 Frame = -3

Query: 702 VCLICE-----FYML*ILPCCLNIRVLVFRYLLLYISISL 598
           +C +C+     F  + I+ C +    +VF +   Y SIS+
Sbjct: 523 LCDVCDSVNRIFGFIIIIGCLIQFNTIVFAFCYCYYSISI 562


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 386  ITSLESEITILHIKSDFINIFASLIT 309
            IT+  S +TI ++   F+  F  LIT
Sbjct: 1226 ITATSSFVTIHNVIGQFLGYFIGLIT 1251


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 624 DNERQVLEYLSSKEGSTAYKTHILNK 701
           DN     +  S + G  A+KTH L+K
Sbjct: 256 DNSNSSEKKSSIQHGDDAHKTHHLDK 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,361
Number of Sequences: 336
Number of extensions: 4268
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)