Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0168
         (655 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g26717.1 68418.m03160 hypothetical protein                          29   3.6  
At3g51000.1 68416.m05584 epoxide hydrolase, putative similar to ...    28   4.7  
At2g17950.1 68415.m02080 homeodomain transcription factor (WUSCH...    28   4.7  
At2g35530.1 68415.m04352 bZIP transcription factor family protei...    25   5.5  
At4g24290.2 68417.m03488 expressed protein                             28   6.2  
At2g48160.1 68415.m06031 PWWP domain-containing protein                28   6.2  
At5g11030.1 68418.m01289 expressed protein                             27   8.2  

>At5g26717.1 68418.m03160 hypothetical protein
          Length = 141

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 9/30 (30%), Positives = 21/30 (70%)
 Frame = +2

Query: 44  KMLCHTLILVLAAGLTSCDVSHLETTTPDP 133
           KM+    ++++A GL +C+ ++++ + PDP
Sbjct: 67  KMMMLMALIMMACGLQACNATNVDESKPDP 96


>At3g51000.1 68416.m05584 epoxide hydrolase, putative similar to
           epoxide hydrolase [Glycine max] GI:2764806; contains
           Pfam profile PF00561: hydrolase, alpha/beta fold family
          Length = 323

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = -1

Query: 382 EVPVFSQGNGFRVSWVLWRHVAQYRMEAFLVSHVVH--CPNLVTWVDVREFSSHDSAAVT 209
           E P+    +GF  +W  WRH        FL SH  H   P+L  + D     SH+S  V+
Sbjct: 26  EGPLVLLLHGFPETWYSWRHQID-----FLSSHGYHVVAPDLRGYGDSDSLPSHESYTVS 80


>At2g17950.1 68415.m02080 homeodomain transcription factor (WUSCHEL)
           99.4% identical to WUSCHELL (GI:4090200) [Arabidopsis
           thaliana]
          Length = 292

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +2

Query: 284 VADKEGFHPILSD---VPPEHPADSESVALAKDRHFQLYSK 397
           +A  + +HP+L     VP + PA+S +V L +D H   ++K
Sbjct: 118 MAANDHYHPLLHHHHGVPMQRPANSVNVKLNQDHHLYHHNK 158


>At2g35530.1 68415.m04352 bZIP transcription factor family protein
           contains Pfam domain PF00170: bZIP transcription factor;
           similar to G-Box binding protein 2 (GI:5381313)
           [Catharanthus roseus].
          Length = 409

 Score = 25.4 bits (53), Expect(2) = 5.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 74  LAAGLTSCDVSHLETTTPDPPPKPYVFS 157
           ++AG+ + D S  +  +P PPP  YV S
Sbjct: 35  VSAGMATPDWSGFQAYSPMPPPHGYVAS 62



 Score = 21.0 bits (42), Expect(2) = 5.5
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +2

Query: 134 PPKPYVFSYTAGRFPGH 184
           PP PYV  Y  G    H
Sbjct: 83  PPHPYVAMYPPGGMYAH 99


>At4g24290.2 68417.m03488 expressed protein
          Length = 606

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 80  AGLTSCDVSHLETTTPDPPPKPYVFSYTAGRFPG 181
           +GL S  +SH  T    PPP+P   +  +  +PG
Sbjct: 504 SGLISTLISHHFTAAQKPPPRPADVNINSAIYPG 537


>At2g48160.1 68415.m06031 PWWP domain-containing protein
          Length = 1366

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +2

Query: 104  SHLETTTPDPPPKP-YVFSYTAGRFPGHVDREHTE 205
            SH     P PPP P + FS+   R PGHV + H +
Sbjct: 1230 SHPHPHPPPPPPPPQHQFSF---REPGHVLKSHRD 1261


>At5g11030.1 68418.m01289 expressed protein 
          Length = 578

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 32  VRDSKMLCHTLILVLAAGLTSCDVSHLETTTPDPPPK 142
           +RD    C  L++ L   LTSC ++HL   T +   K
Sbjct: 248 IRDKAASCIPLVIQLEPFLTSCGLTHLGLITGNDTEK 284


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,337,682
Number of Sequences: 28952
Number of extensions: 275926
Number of successful extensions: 1092
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)