Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0173
(376 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118976-1|AAM50836.2| 147|Drosophila melanogaster LP01241p pro... 34 0.068
AF017777-12|AAC28405.1| 145|Drosophila melanogaster la costa pr... 32 0.28
AE014298-3140|AAF50816.1| 145|Drosophila melanogaster CG12794-P... 32 0.28
BT003655-1|AAO39659.1| 722|Drosophila melanogaster AT01386p pro... 31 0.36
AF038597-1|AAC97538.1| 254|Drosophila melanogaster ornithine de... 31 0.36
AE013599-1406|AAF58570.2| 248|Drosophila melanogaster CG16747-P... 31 0.36
AE013599-1405|AAF58567.2| 270|Drosophila melanogaster CG16747-P... 31 0.36
AE013599-1404|AAF58569.2| 254|Drosophila melanogaster CG16747-P... 31 0.36
BT030131-1|ABN49270.1| 1374|Drosophila melanogaster IP15972p pro... 31 0.48
AY118512-1|AAM49881.1| 911|Drosophila melanogaster LD14119p pro... 31 0.48
AE014134-2505|AAN10878.2| 1373|Drosophila melanogaster CG3479-PB... 31 0.48
AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA... 31 0.48
BT029276-1|ABK30913.1| 251|Drosophila melanogaster IP09812p pro... 29 1.9
AY089664-1|AAL90402.1| 251|Drosophila melanogaster RH30329p pro... 29 1.9
AE014297-566|AAF54058.3| 251|Drosophila melanogaster CG33323-PA... 29 1.9
AE013599-560|AAF59155.2| 2482|Drosophila melanogaster CG11198-PA... 29 2.6
AY075484-1|AAL68294.1| 634|Drosophila melanogaster RE39769p pro... 28 3.4
AY075288-1|AAL68155.1| 93|Drosophila melanogaster AT30578p pro... 28 3.4
AE013599-2847|AAF57587.2| 634|Drosophila melanogaster CG11906-P... 28 3.4
BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p pro... 28 4.5
AY089617-1|AAL90355.1| 958|Drosophila melanogaster RE32881p pro... 28 4.5
AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal pr... 28 4.5
AE014298-1748|AAF48140.5| 1040|Drosophila melanogaster CG32656-P... 28 4.5
AE014297-116|AAF52115.2| 559|Drosophila melanogaster CG12586-PA... 28 4.5
AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA ... 28 4.5
AE014296-161|AAF47434.1| 841|Drosophila melanogaster CG13908-PA... 28 4.5
L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprot... 27 5.9
AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p pro... 27 5.9
AE014297-1832|AAF55042.1| 588|Drosophila melanogaster CG3259-PA... 27 5.9
AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA... 27 5.9
BT022525-1|AAY54941.1| 232|Drosophila melanogaster IP06465p pro... 27 7.9
AY071313-1|AAL48935.1| 663|Drosophila melanogaster RE33814p pro... 27 7.9
AF145652-1|AAD38627.1| 499|Drosophila melanogaster BcDNA.GH0878... 27 7.9
AE014298-2597|AAF48752.2| 663|Drosophila melanogaster CG12990-P... 27 7.9
AE013599-801|AAF58981.2| 499|Drosophila melanogaster CG18659-PB... 27 7.9
AE013599-800|AAM68810.2| 908|Drosophila melanogaster CG18659-PA... 27 7.9
>AY118976-1|AAM50836.2| 147|Drosophila melanogaster LP01241p
protein.
Length = 147
Score = 33.9 bits (74), Expect = 0.068
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = -2
Query: 360 SGRCRAVSRDIRTTTEARRPGTARNTRRPK-----PTELSVCCRERSETPRHRNKPSRPV 196
S R S TTT + RP TA R P+ PTE S R+R + R R P+R
Sbjct: 37 SPRSAPTSSPRATTTTSTRPATASPPRSPELVETTPTEASRGTRQRVSSSRSRTWPTRTA 96
Query: 195 WSRR 184
S R
Sbjct: 97 TSHR 100
>AF017777-12|AAC28405.1| 145|Drosophila melanogaster la costa
protein.
Length = 145
Score = 31.9 bits (69), Expect = 0.28
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 301 WAPGLCGGPDVPAHGSAPPGGVPGG 375
W PG GGP P G PG PGG
Sbjct: 24 WGPGGPGGPGGPGRGRGGPGRGPGG 48
>AE014298-3140|AAF50816.1| 145|Drosophila melanogaster CG12794-PA
protein.
Length = 145
Score = 31.9 bits (69), Expect = 0.28
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 301 WAPGLCGGPDVPAHGSAPPGGVPGG 375
W PG GGP P G PG PGG
Sbjct: 24 WGPGGPGGPGGPGRGRGGPGRGPGG 48
>BT003655-1|AAO39659.1| 722|Drosophila melanogaster AT01386p
protein.
Length = 722
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 354 RCRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPR 223
RC D+ +T E RPG RR P + + C E+ PR
Sbjct: 61 RCPPSGVDLVSTPEHLRPGFRGRARRYNPNDFELTCNEQWRHPR 104
>AF038597-1|AAC97538.1| 254|Drosophila melanogaster ornithine
decarboxylase antizyme protein.
Length = 254
Score = 31.5 bits (68), Expect = 0.36
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 249 SKRSALSASDAECFSLCLGAGPLWWS*CP 335
S S + +E + + LG GPLWWS P
Sbjct: 36 STSSCATTMSSESYRISLGVGPLWWSDVP 64
>AE013599-1406|AAF58570.2| 248|Drosophila melanogaster CG16747-PB,
isoform B protein.
Length = 248
Score = 31.5 bits (68), Expect = 0.36
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 249 SKRSALSASDAECFSLCLGAGPLWWS*CP 335
S S + +E + + LG GPLWWS P
Sbjct: 30 STSSCATTMSSESYRISLGVGPLWWSDVP 58
>AE013599-1405|AAF58567.2| 270|Drosophila melanogaster CG16747-PC,
isoform C protein.
Length = 270
Score = 31.5 bits (68), Expect = 0.36
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 249 SKRSALSASDAECFSLCLGAGPLWWS*CP 335
S S + +E + + LG GPLWWS P
Sbjct: 52 STSSCATTMSSESYRISLGVGPLWWSDVP 80
>AE013599-1404|AAF58569.2| 254|Drosophila melanogaster CG16747-PA,
isoform A protein.
Length = 254
Score = 31.5 bits (68), Expect = 0.36
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 249 SKRSALSASDAECFSLCLGAGPLWWS*CP 335
S S + +E + + LG GPLWWS P
Sbjct: 36 STSSCATTMSSESYRISLGVGPLWWSDVP 64
>BT030131-1|ABN49270.1| 1374|Drosophila melanogaster IP15972p
protein.
Length = 1374
Score = 31.1 bits (67), Expect = 0.48
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = -2
Query: 369 GHPSGRCRAVSRDIRTTTEARRPGTAR--NTRRPKPTELSVCCRERSETPRHRNKPSRPV 196
G P+G + + RT +E R + + P P L C R RS H+ S P
Sbjct: 638 GTPAGPHFSSDEEYRTASEGGRRDSLDWGSPLSPSPPVLRSCLRNRSLASLHKRSRSSPP 697
Query: 195 WSRRS 181
SRRS
Sbjct: 698 SSRRS 702
>AY118512-1|AAM49881.1| 911|Drosophila melanogaster LD14119p
protein.
Length = 911
Score = 31.1 bits (67), Expect = 0.48
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = -2
Query: 369 GHPSGRCRAVSRDIRTTTEARRPGTAR--NTRRPKPTELSVCCRERSETPRHRNKPSRPV 196
G P+G + + RT +E R + + P P L C R RS H+ S P
Sbjct: 163 GTPAGPHFSSDEEYRTASEGGRRDSLDWGSPLSPSPPVLRSCLRNRSLASLHKRSRSSPP 222
Query: 195 WSRRS 181
SRRS
Sbjct: 223 SSRRS 227
>AE014134-2505|AAN10878.2| 1373|Drosophila melanogaster CG3479-PB,
isoform B protein.
Length = 1373
Score = 31.1 bits (67), Expect = 0.48
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = -2
Query: 369 GHPSGRCRAVSRDIRTTTEARRPGTAR--NTRRPKPTELSVCCRERSETPRHRNKPSRPV 196
G P+G + + RT +E R + + P P L C R RS H+ S P
Sbjct: 625 GTPAGPHFSSDEEYRTASEGGRRDSLDWGSPLSPSPPVLRSCLRNRSLASLHKRSRSSPP 684
Query: 195 WSRRS 181
SRRS
Sbjct: 685 SSRRS 689
>AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA,
isoform A protein.
Length = 1553
Score = 31.1 bits (67), Expect = 0.48
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = -2
Query: 369 GHPSGRCRAVSRDIRTTTEARRPGTAR--NTRRPKPTELSVCCRERSETPRHRNKPSRPV 196
G P+G + + RT +E R + + P P L C R RS H+ S P
Sbjct: 625 GTPAGPHFSSDEEYRTASEGGRRDSLDWGSPLSPSPPVLRSCLRNRSLASLHKRSRSSPP 684
Query: 195 WSRRS 181
SRRS
Sbjct: 685 SSRRS 689
>BT029276-1|ABK30913.1| 251|Drosophila melanogaster IP09812p
protein.
Length = 251
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 141 SSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSA 272
S + Y N N + + Q +SG GA +S PG+ S S+
Sbjct: 204 SQPLPLYNNSNSNQNQNSNQSSDDFSGSGADMSDPGAAASIFSS 247
>AY089664-1|AAL90402.1| 251|Drosophila melanogaster RH30329p
protein.
Length = 251
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 141 SSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSA 272
S + Y N N + + Q +SG GA +S PG+ S S+
Sbjct: 204 SQPLPLYNNSNSNQNQNSNQSSDDFSGSGADMSDPGAAASIFSS 247
>AE014297-566|AAF54058.3| 251|Drosophila melanogaster CG33323-PA
protein.
Length = 251
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 141 SSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSA 272
S + Y N N + + Q +SG GA +S PG+ S S+
Sbjct: 204 SQPLPLYNNSNSNQNQNSNQSSDDFSGSGADMSDPGAAASIFSS 247
>AE013599-560|AAF59155.2| 2482|Drosophila melanogaster CG11198-PA,
isoform A protein.
Length = 2482
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 129 QLNCSSSISKYYNGNGVD-SVE-TKQVEKVYSGDGASLSAPGSKRSALSASDAE 284
Q N +SSI+K N N +D S+ +K E S D A+ SA G + S L + +
Sbjct: 135 QNNNNSSINKNQNNNSIDISISISKMSETNESNDTAAQSAEGERPSFLVGDEID 188
>AY075484-1|AAL68294.1| 634|Drosophila melanogaster RE39769p
protein.
Length = 634
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -2
Query: 285 TRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPHHFHC 163
TRR +P V CR +E PSR + S R + HC
Sbjct: 224 TRRKQPRPSRVKCRVLNEASYDEEAPSRAIRSSRIYYCRHC 264
>AY075288-1|AAL68155.1| 93|Drosophila melanogaster AT30578p
protein.
Length = 93
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 330 IRTTTEARRP-GTARNTRRPKPTELSVCCRERSETPRHRNKPSR 202
+RT+T RRP R TR+ KP + S RHR++ R
Sbjct: 34 VRTSTSRRRPVHRHRLTRQVKPVRAPLTTNNSSLGSRHRHRMER 77
>AE013599-2847|AAF57587.2| 634|Drosophila melanogaster CG11906-PA
protein.
Length = 634
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -2
Query: 285 TRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPHHFHC 163
TRR +P V CR +E PSR + S R + HC
Sbjct: 224 TRRKQPRPSRVKCRVLNEASYDEEAPSRAIRSSRIYYCRHC 264
>BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p
protein.
Length = 269
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 339 SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSE 232
+R IRT RRP T + R PK SV R R +
Sbjct: 150 ARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMD 185
>AY089617-1|AAL90355.1| 958|Drosophila melanogaster RE32881p
protein.
Length = 958
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 304 APGLCGGPDVPAHGSAPPGGVPGG 375
A G P PA GS P GG P G
Sbjct: 492 ADGSSAAPGSPAEGSPPAGGSPAG 515
>AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal
protein L23a protein.
Length = 269
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 339 SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSE 232
+R IRT RRP T + R PK SV R R +
Sbjct: 150 ARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMD 185
>AE014298-1748|AAF48140.5| 1040|Drosophila melanogaster CG32656-PA
protein.
Length = 1040
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 304 APGLCGGPDVPAHGSAPPGGVPGG 375
A G P PA GS P GG P G
Sbjct: 574 ADGSSAAPGSPAEGSPPAGGSPAG 597
>AE014297-116|AAF52115.2| 559|Drosophila melanogaster CG12586-PA
protein.
Length = 559
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +1
Query: 301 WAPGLCGGPDVPAHGSAPPGGVPGG 375
W PG GGP P +G PGG PGG
Sbjct: 422 WGPGGPGGPGGP-NGPGGPGG-PGG 444
>AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA
protein.
Length = 277
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 339 SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSE 232
+R IRT RRP T + R PK SV R R +
Sbjct: 158 ARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMD 193
>AE014296-161|AAF47434.1| 841|Drosophila melanogaster CG13908-PA
protein.
Length = 841
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = -1
Query: 364 PLRAVQSREQGHQDH---HRGPAPRHSEKHSASEADRAERLLPGALRDA 227
PL Q R+ H H H P H H + + R+ R G+L A
Sbjct: 151 PLHHCQQRKHSHSPHHSRHTSPHSHHHHSHHSRHSRRSRRQGSGSLPGA 199
>L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprotein
protein.
Length = 199
Score = 27.5 bits (58), Expect = 5.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 304 APGLCGGPDVPAHGSAPPGGVPGG 375
AP G P P G+ PPG +PGG
Sbjct: 141 APMGRGVPRAPMMGAPPPGMIPGG 164
>AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p
protein.
Length = 199
Score = 27.5 bits (58), Expect = 5.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 304 APGLCGGPDVPAHGSAPPGGVPGG 375
AP G P P G+ PPG +PGG
Sbjct: 141 APMGRGVPRAPMMGAPPPGMIPGG 164
>AE014297-1832|AAF55042.1| 588|Drosophila melanogaster CG3259-PA
protein.
Length = 588
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = -2
Query: 375 PAGHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPSRPV 196
PAG R + I + R + +R PTE +++S+ P+ K SR
Sbjct: 159 PAGKDEDAKRRKEKRISPQEQKLRKVKEQVSRSTPPTEKDKASQKKSKAPKDETKLSRQN 218
Query: 195 WSRRSP 178
++SP
Sbjct: 219 SKQKSP 224
>AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA
protein.
Length = 199
Score = 27.5 bits (58), Expect = 5.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 304 APGLCGGPDVPAHGSAPPGGVPGG 375
AP G P P G+ PPG +PGG
Sbjct: 141 APMGRGVPRAPMMGAPPPGMIPGG 164
>BT022525-1|AAY54941.1| 232|Drosophila melanogaster IP06465p
protein.
Length = 232
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -2
Query: 351 CRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKP 208
C V+ R T A T PTE + CC RS P NKP
Sbjct: 171 CHFVNNICRLATSRSATWDANATLASIPTEETKCC--RSAMPNKPNKP 216
>AY071313-1|AAL48935.1| 663|Drosophila melanogaster RE33814p
protein.
Length = 663
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 242 SAQRRPVTGINLLDLFGLDGVH 177
S + RPV G+ +L F L GVH
Sbjct: 245 SQENRPVNGLRVLTAFSLIGVH 266
>AF145652-1|AAD38627.1| 499|Drosophila melanogaster BcDNA.GH08789
protein.
Length = 499
Score = 27.1 bits (57), Expect = 7.9
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 9/65 (13%)
Frame = -2
Query: 366 HPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRER---------SETPRHRN 214
HP + AV R ++ E RR G A R P P S+ PRH +
Sbjct: 182 HPLFKTPAVDRSLKPNAEHRR-GAAPPARPPPPQSTPASYYNHPYAAHPHVESKPPRHTS 240
Query: 213 KPSRP 199
P+RP
Sbjct: 241 TPTRP 245
>AE014298-2597|AAF48752.2| 663|Drosophila melanogaster CG12990-PA
protein.
Length = 663
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 242 SAQRRPVTGINLLDLFGLDGVH 177
S + RPV G+ +L F L GVH
Sbjct: 245 SQENRPVNGLRVLTAFSLIGVH 266
>AE013599-801|AAF58981.2| 499|Drosophila melanogaster CG18659-PB,
isoform B protein.
Length = 499
Score = 27.1 bits (57), Expect = 7.9
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 9/65 (13%)
Frame = -2
Query: 366 HPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRER---------SETPRHRN 214
HP + AV R ++ E RR G A R P P S+ PRH +
Sbjct: 182 HPLFKTPAVDRSLKPNAEHRR-GAAPPARPPPPQSTPASYYNHPYAAHPHVESKPPRHTS 240
Query: 213 KPSRP 199
P+RP
Sbjct: 241 TPTRP 245
>AE013599-800|AAM68810.2| 908|Drosophila melanogaster CG18659-PA,
isoform A protein.
Length = 908
Score = 27.1 bits (57), Expect = 7.9
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 9/65 (13%)
Frame = -2
Query: 366 HPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRER---------SETPRHRN 214
HP + AV R ++ E RR G A R P P S+ PRH +
Sbjct: 591 HPLFKTPAVDRSLKPNAEHRR-GAAPPARPPPPQSTPASYYNHPYAAHPHVESKPPRHTS 649
Query: 213 KPSRP 199
P+RP
Sbjct: 650 TPTRP 654
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,414,314
Number of Sequences: 53049
Number of extensions: 386028
Number of successful extensions: 2342
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2338
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 982468965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -