Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120513.Seq
(624 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 144 5e-35
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 144 5e-35
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 141 4e-34
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 136 2e-32
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 134 5e-32
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 132 1e-31
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 88 4e-18
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 85 5e-17
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 85 5e-17
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 80 1e-15
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 44 7e-05
AF016681-20|AAB66167.1| 370|Caenorhabditis elegans Hypothetical... 29 2.0
Z46343-7|CAE17971.2| 187|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 28 4.7
AF000198-4|AAB53058.2| 175|Caenorhabditis elegans Hypothetical ... 27 8.2
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 144 bits (349), Expect = 5e-35
Identities = 69/115 (60%), Positives = 88/115 (76%), Gaps = 3/115 (2%)
Frame = +1
Query: 256 TKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAA 435
TKTGM++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAA
Sbjct: 48 TKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAA 107
Query: 436 GVHENRNDEEVGAGDQGLMFGYATVRQKNACR*L*CLH---TNSIRKLQSSGEME 591
GVH +++ ++VGAGDQG+MFGYAT + A L + +L+ SGE+E
Sbjct: 108 GVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELE 162
Score = 84.6 bits (200), Expect = 5e-17
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = +2
Query: 131 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETKLK 262
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET K
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTK 49
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 144 bits (349), Expect = 5e-35
Identities = 69/115 (60%), Positives = 88/115 (76%), Gaps = 3/115 (2%)
Frame = +1
Query: 256 TKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAA 435
TKTGM++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAA
Sbjct: 48 TKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAA 107
Query: 436 GVHENRNDEEVGAGDQGLMFGYATVRQKNACR*L*CLH---TNSIRKLQSSGEME 591
GVH +++ ++VGAGDQG+MFGYAT + A L + +L+ SGE+E
Sbjct: 108 GVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELE 162
Score = 84.6 bits (200), Expect = 5e-17
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = +2
Query: 131 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETKLK 262
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET K
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTK 49
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 141 bits (341), Expect = 4e-34
Identities = 69/115 (60%), Positives = 87/115 (75%), Gaps = 3/115 (2%)
Frame = +1
Query: 256 TKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAA 435
TKTGM++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAA
Sbjct: 48 TKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAA 107
Query: 436 GVHENRNDEEVGAGDQGLMFGYATVRQKNACR*L*CLH---TNSIRKLQSSGEME 591
GVH +++ +VGAGDQG+MFGYAT + A L + +L+ SGE+E
Sbjct: 108 GVHVDKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELE 162
Score = 84.6 bits (200), Expect = 5e-17
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = +2
Query: 131 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETKLK 262
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET K
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTK 49
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 136 bits (328), Expect = 2e-32
Identities = 65/111 (58%), Positives = 84/111 (75%), Gaps = 3/111 (2%)
Frame = +1
Query: 268 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 447
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 448 NRNDEEVGAGDQGLMFGYATVRQKNACR*L*CLH---TNSIRKLQSSGEME 591
+++ ++VGAGDQG+MFGYAT + A L + +L+ SGE+E
Sbjct: 61 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELE 111
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 134 bits (324), Expect = 5e-32
Identities = 60/84 (71%), Positives = 74/84 (88%)
Frame = +1
Query: 256 TKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAA 435
TKTGMV+LCGEITSKA VDYQ +VR ++ IG+ DSS GFD+KTC+V++AL+QQSP IAA
Sbjct: 47 TKTGMVMLCGEITSKAVVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAA 106
Query: 436 GVHENRNDEEVGAGDQGLMFGYAT 507
GVH N++ E+VGAGDQG+MFGYAT
Sbjct: 107 GVHVNKDGEDVGAGDQGIMFGYAT 130
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +2
Query: 125 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETKLK 262
S FLFTSESV EGHPDKMCDQISDA+LDAHL QDP+AKVACET K
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTK 48
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +3
Query: 483 GLDVRLCNSETEECMPLTVVLAHKLNPKIAELRRNG 590
G+ ETEE MPLT++L+HK+N ++ +LRRNG
Sbjct: 123 GIMFGYATDETEETMPLTLILSHKINAELHKLRRNG 158
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 132 bits (320), Expect = 1e-31
Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 3/111 (2%)
Frame = +1
Query: 268 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 447
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 448 NRNDEEVGAGDQGLMFGYATVRQKNACR*L*CLH---TNSIRKLQSSGEME 591
+++ +VGAGDQG+MFGYAT + A L + +L+ SGE+E
Sbjct: 61 DKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELE 111
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 88.2 bits (209), Expect = 4e-18
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Frame = +1
Query: 349 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATVRQKNAC 528
GY D GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYAT + A
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAM 79
Query: 529 R*L*CLH---TNSIRKLQSSGEME 591
L + +L+ SGE+E
Sbjct: 80 PLTLLLSHKLNRKLHELRRSGELE 103
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 84.6 bits (200), Expect = 5e-17
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = +2
Query: 131 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETKLK 262
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET K
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTK 49
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +1
Query: 256 TKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKG 372
TKTGM++LCGEITSKA VDYQ +VR +K IGYDDSSKG
Sbjct: 48 TKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKG 86
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 84.6 bits (200), Expect = 5e-17
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 6/89 (6%)
Frame = +1
Query: 343 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATVR 513
H+ D +K GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYAT
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDE 92
Query: 514 QKNACR*L*CLH---TNSIRKLQSSGEME 591
+ A L + +L+ SGE+E
Sbjct: 93 TEEAMPLTLLLSHKLNRKLHELRRSGELE 121
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +2
Query: 131 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 247
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +2
Query: 131 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 247
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 131 FLFTSESVGEGHPDKMCDQ 187
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>AF016681-20|AAB66167.1| 370|Caenorhabditis elegans Hypothetical
protein F22E5.1 protein.
Length = 370
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 248 ETKLKPVWCFCVAKSHPKLTWIIKKLCAKRSNILVMMIRPKALITR 385
E + KP+ + K HP + W+ L K+ N++ +M++ A T+
Sbjct: 193 EYRFKPLLLAELLKEHPNIWWMDAHLSVKKPNMVELMMKEVAEKTK 238
>Z46343-7|CAE17971.2| 187|Caenorhabditis elegans Hypothetical
protein T23F11.6 protein.
Length = 187
Score = 28.3 bits (60), Expect = 4.7
Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = -3
Query: 607 SCPQNSPFRLSSAIFGLSLCASTT-VNGMHSSVSLLHNRTSSPGLLPQLPRHFCSHAPQQ 431
SC RL+ + G +L + T VN S SL + LLP+ FCS
Sbjct: 49 SCQNGYICRLNRCVGGRALASKTKYVNEEESEYSLKMEQCCVDNLLPERCMGFCSFETYN 108
Query: 430 QCLVIVGLVRASHCMSCNQSLWTNH 356
+ + L C S SL T H
Sbjct: 109 ESSIFRLLAEPRRCPS--SSLRTIH 131
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +2
Query: 296 PKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 388
PK+ W ++K+C K+ +I + I P+ L+T H
Sbjct: 253 PKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286
>AF000198-4|AAB53058.2| 175|Caenorhabditis elegans Hypothetical
protein T28F2.2 protein.
Length = 175
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 305 TWIIKKLCAKRSNILVMMIRPKALITRHAV*CSH 406
+W+++++C SN+ V+ + H V C H
Sbjct: 5 SWLLEEICTNFSNLTVLKFKELCNRASHLVLCGH 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,156,588
Number of Sequences: 27780
Number of extensions: 369533
Number of successful extensions: 1054
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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