BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG1663
(706 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol... 25 1.8
AF457549-1|AAL68779.1| 257|Anopheles gambiae antigen 5-related ... 25 1.8
AF079312-1|AAC28093.1| 271|Anopheles gambiae 60S ribosomal prot... 25 2.3
DQ974165-1|ABJ52805.1| 482|Anopheles gambiae serpin 5 protein. 24 4.1
AJ970243-1|CAI96715.1| 129|Anopheles gambiae putative reverse t... 23 7.1
DQ396550-1|ABD60145.1| 113|Anopheles gambiae adipokinetic hormo... 23 9.4
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 23 9.4
>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
protein.
Length = 1344
Score = 25.4 bits (53), Expect = 1.8
Identities = 22/71 (30%), Positives = 38/71 (53%)
Frame = +2
Query: 11 RHEDDNINPKDLKTFFLSCNNEKKV*KLTSFPITATHTAIVNQYI*NRKQNTELSLRAAT 190
R+ DN++ DL+ + N+K + +L S I A ++V Y+ + +QN EL++R
Sbjct: 944 RNLSDNLS--DLRAQIAA--NQKGI-QLVSELIDAYGLSVVQAYMGHMQQNAELAVRDML 998
Query: 191 LTD*NFTRERS 223
T RER+
Sbjct: 999 RTIAQEARERT 1009
>AF457549-1|AAL68779.1| 257|Anopheles gambiae antigen 5-related 2
protein protein.
Length = 257
Score = 25.4 bits (53), Expect = 1.8
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = +3
Query: 408 FIRFTNRSSR----PVAVWWRDFQGRKQHYINLDPT 503
F R TN S+ +A WW ++ KQ +N P+
Sbjct: 137 FSRMTNTISQLISTNIASWWNEYSFTKQEQLNFYPS 172
>AF079312-1|AAC28093.1| 271|Anopheles gambiae 60S ribosomal protein
rpL7a protein.
Length = 271
Score = 25.0 bits (52), Expect = 2.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 641 ISPKQDLTYNRRWSKYLLIVYHEDV 567
+ PK+DL+ +W KY+ I H +
Sbjct: 51 VQPKRDLSRFVKWPKYIRIQRHRAI 75
>DQ974165-1|ABJ52805.1| 482|Anopheles gambiae serpin 5 protein.
Length = 482
Score = 24.2 bits (50), Expect = 4.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 279 AFDWHNRVTKMYGVGTTDSN 338
AF + NR T MY V DSN
Sbjct: 315 AFPYRNRTTSMYIVLPNDSN 334
>AJ970243-1|CAI96715.1| 129|Anopheles gambiae putative reverse
transcriptase protein.
Length = 129
Score = 23.4 bits (48), Expect = 7.1
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = +3
Query: 432 SRPVAVWWRDFQGRKQHYINLD 497
S P+ W+R + + +Y+ +D
Sbjct: 92 STPLVKWFRSYISERSYYVQID 113
>DQ396550-1|ABD60145.1| 113|Anopheles gambiae adipokinetic hormone
II protein.
Length = 113
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 594 IFRPPPIVGQVLFRTNWN 647
+ P P GQV F +WN
Sbjct: 23 VLLPVPSAGQVTFSRDWN 40
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 23.0 bits (47), Expect = 9.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 406 HSSASRTVPPGQWRSGGGTSK 468
H+ + R+ PPG GGG K
Sbjct: 1407 HNGSGRSKPPGPEGVGGGGGK 1427
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 783,869
Number of Sequences: 2352
Number of extensions: 16268
Number of successful extensions: 77
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -