Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG1663
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138668-1|ABA86274.1|  165|Drosophila melanogaster CG13221 prot...    47   2e-05
BT023867-1|AAZ86788.1|  178|Drosophila melanogaster IP02669p pro...    47   2e-05
AY075555-1|AAL68362.1|  178|Drosophila melanogaster RH61560p pro...    47   2e-05
AF195836-1|AAF29377.1|  178|Drosophila melanogaster von Hippel-L...    47   2e-05
AE013599-1249|AAF58684.1|  178|Drosophila melanogaster CG13221-P...    47   2e-05
BT001608-1|AAN71363.1|  536|Drosophila melanogaster RE31673p pro...    29   4.7  
AF145686-1|AAD38661.1|  520|Drosophila melanogaster LD24639p pro...    29   4.7  
AE014134-1098|AAN10586.1|  483|Drosophila melanogaster CG9535-PB...    29   4.7  
AE014134-1097|AAF52387.1|  520|Drosophila melanogaster CG9535-PA...    29   4.7  

>DQ138668-1|ABA86274.1|  165|Drosophila melanogaster CG13221
           protein.
          Length = 165

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 20/66 (30%), Positives = 36/66 (54%)
 Frame = +3

Query: 408 FIRFTNRSSRPVAVWWRDFQGRKQHYINLDPTDFFDINTFVTHPWEFSDAATTDVFVINN 587
           ++ F N + R + ++W   + R+  Y+ L P +   +NTF TH W F D  T +   + +
Sbjct: 19  YVLFANTTYRTLDLYWVCERERENMYLTLKPFEEVRVNTFTTHSWLFRDYYTGERMHVRS 78

Query: 588 KEIFRP 605
           + IF+P
Sbjct: 79  QRIFQP 84


>BT023867-1|AAZ86788.1|  178|Drosophila melanogaster IP02669p
           protein.
          Length = 178

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 20/66 (30%), Positives = 36/66 (54%)
 Frame = +3

Query: 408 FIRFTNRSSRPVAVWWRDFQGRKQHYINLDPTDFFDINTFVTHPWEFSDAATTDVFVINN 587
           ++ F N + R + ++W   + R+  Y+ L P +   +NTF TH W F D  T +   + +
Sbjct: 26  YVLFANTTYRTLDLYWVCERERENMYLTLKPFEEVRVNTFTTHSWLFRDYYTGERMHVRS 85

Query: 588 KEIFRP 605
           + IF+P
Sbjct: 86  QRIFQP 91


>AY075555-1|AAL68362.1|  178|Drosophila melanogaster RH61560p
           protein.
          Length = 178

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 20/66 (30%), Positives = 36/66 (54%)
 Frame = +3

Query: 408 FIRFTNRSSRPVAVWWRDFQGRKQHYINLDPTDFFDINTFVTHPWEFSDAATTDVFVINN 587
           ++ F N + R + ++W   + R+  Y+ L P +   +NTF TH W F D  T +   + +
Sbjct: 26  YVLFANTTYRTLDLYWVCERERENMYLTLKPFEEVRVNTFTTHSWLFRDYYTGERMHVRS 85

Query: 588 KEIFRP 605
           + IF+P
Sbjct: 86  QRIFQP 91


>AF195836-1|AAF29377.1|  178|Drosophila melanogaster von
           Hippel-Lindau tumor suppressorVHL protein.
          Length = 178

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 20/66 (30%), Positives = 36/66 (54%)
 Frame = +3

Query: 408 FIRFTNRSSRPVAVWWRDFQGRKQHYINLDPTDFFDINTFVTHPWEFSDAATTDVFVINN 587
           ++ F N + R + ++W   + R+  Y+ L P +   +NTF TH W F D  T +   + +
Sbjct: 26  YVLFANTTYRTLDLYWVCERERENMYLTLKPFEEVRVNTFTTHSWLFRDYYTGERMHVRS 85

Query: 588 KEIFRP 605
           + IF+P
Sbjct: 86  QRIFQP 91


>AE013599-1249|AAF58684.1|  178|Drosophila melanogaster CG13221-PA
           protein.
          Length = 178

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 20/66 (30%), Positives = 36/66 (54%)
 Frame = +3

Query: 408 FIRFTNRSSRPVAVWWRDFQGRKQHYINLDPTDFFDINTFVTHPWEFSDAATTDVFVINN 587
           ++ F N + R + ++W   + R+  Y+ L P +   +NTF TH W F D  T +   + +
Sbjct: 26  YVLFANTTYRTLDLYWVCERERENMYLTLKPFEEVRVNTFTTHSWLFRDYYTGERMHVRS 85

Query: 588 KEIFRP 605
           + IF+P
Sbjct: 86  QRIFQP 91


>BT001608-1|AAN71363.1|  536|Drosophila melanogaster RE31673p
           protein.
          Length = 536

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = +2

Query: 368 ASGREISCVVATGIHPLHEPFLQASGGLVEG 460
           A+G++      + +H LH+ +++ +GG+V G
Sbjct: 464 AAGKDCPSTARSDLHRLHKKYIEGAGGIVHG 494


>AF145686-1|AAD38661.1|  520|Drosophila melanogaster LD24639p
           protein.
          Length = 520

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = +2

Query: 368 ASGREISCVVATGIHPLHEPFLQASGGLVEG 460
           A+G++      + +H LH+ +++ +GG+V G
Sbjct: 448 AAGKDCPSTARSDLHRLHKKYIEGAGGIVHG 478


>AE014134-1098|AAN10586.1|  483|Drosophila melanogaster CG9535-PB,
           isoform B protein.
          Length = 483

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = +2

Query: 368 ASGREISCVVATGIHPLHEPFLQASGGLVEG 460
           A+G++      + +H LH+ +++ +GG+V G
Sbjct: 411 AAGKDCPSTARSDLHRLHKKYIEGAGGIVHG 441


>AE014134-1097|AAF52387.1|  520|Drosophila melanogaster CG9535-PA,
           isoform A protein.
          Length = 520

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = +2

Query: 368 ASGREISCVVATGIHPLHEPFLQASGGLVEG 460
           A+G++      + +H LH+ +++ +GG+V G
Sbjct: 448 AAGKDCPSTARSDLHRLHKKYIEGAGGIVHG 478


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,782,653
Number of Sequences: 53049
Number of extensions: 742957
Number of successful extensions: 1689
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1689
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)