Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_I18
         (886 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    26   0.53 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.8  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              23   4.9  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              23   4.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   8.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   8.6  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 9/39 (23%), Positives = 23/39 (58%)
 Frame = -3

Query: 704 NYKIY*VSINNYVSMNIGAHSEIFCFWNFPYSWKMSLGI 588
           NY ++ ++I++ + + +G  +E+  FW   Y W + + +
Sbjct: 76  NYYLFSLAISDLILLVLGLPNELSLFWQ-QYPWVLGVSL 113


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +3

Query: 240 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQS 347
           QC  C+K     ++   +RR   + +P  C  C ++
Sbjct: 121 QCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERA 156



 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +3

Query: 240 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQC 338
           +C+ C+K    S     + R     KP VC  C
Sbjct: 177 KCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKAC 209


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +1

Query: 550 DQEELRHYDEHFLIPRDIFQE*GKFQKQKISECAPIFIE 666
           + E+ + Y+E  L   +I  E G F++  + E   I+++
Sbjct: 55  EDEKPQRYNECILKQFNIVDESGNFKENIVQELTSIYLD 93


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +1

Query: 550 DQEELRHYDEHFLIPRDIFQE*GKFQKQKISECAPIFIE 666
           + E+ + Y+E  L   +I  E G F++  + E   I+++
Sbjct: 55  EDEKPQRYNECILKQFNIVDESGNFKENIVQELTSIYLD 93


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +2

Query: 533 DDMRRRIKKNCGIMMSTF*FRGTFSKNRESSRNKRFRSAR 652
           DD+R+++  +  +++++   +G       S+RNK+  SAR
Sbjct: 561 DDLRQKVLPDGTLVITSVQKKGDAGVYTCSARNKQGHSAR 600


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +2

Query: 533 DDMRRRIKKNCGIMMSTF*FRGTFSKNRESSRNKRFRSAR 652
           DD+R+++  +  +++++   +G       S+RNK+  SAR
Sbjct: 561 DDLRQKVLPDGTLVITSVQKKGDAGVYTCSARNKQGHSAR 600


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,910
Number of Sequences: 438
Number of extensions: 5982
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)