Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_G08
         (836 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    28   0.12 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             26   0.50 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   1.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.1  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   8.1  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
 Frame = +2

Query: 128 QVRSSLRLHRSGPRSDGATRRSRLLQGTSNTT-----PRSSIRLYNNSLTRSPSQRTHRT 292
           ++  +LR+HR G  +  A    R    T         P ++I+ +NN LTR PS R ++ 
Sbjct: 253 ELELTLRIHRGGGTNTDARHLFRTASSTPEDLQDLEEPLTTIQ-HNNCLTRIPSTRINKQ 311

Query: 293 SAR 301
             R
Sbjct: 312 HTR 314


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.8 bits (54), Expect = 0.50
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = +2

Query: 560  LERAGD**ETGAQDQGRLRRL---REEHPGGDQEDPGR 664
            + RAG   E   +D  +L R    RE H GG QED  R
Sbjct: 1403 ISRAGSRDEDSTRDSTKLDRSSREREVHNGGQQEDRDR 1440


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 18   LHHYREFLKILTHSSVLQSWIRISFRTQI 104
            +H  R  L +LT + +L  W R  FR  +
Sbjct: 1121 VHASRRVLIVLTRNFLLTEWSRFEFRAAL 1149


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 179 HHRSLGQSDAGEENYELGGHDVL 111
           HH+    + AG +   L GH VL
Sbjct: 920 HHQIQVSTSAGLQTIRLSGHSVL 942


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +3

Query: 291 LQQGLEGRLRVRAATAQRLRQESPGQRSETRTARPRR 401
           L+QG++  L +  A     R  SP + +E+    P R
Sbjct: 357 LKQGIQFHLYINTAPCGDARIFSPHEENESVDKHPNR 393


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,770
Number of Sequences: 438
Number of extensions: 2958
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)