Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_D19
         (886 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    24   1.6  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           24   2.1  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    23   4.9  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    23   4.9  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    23   4.9  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    23   4.9  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         23   4.9  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   4.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   8.6  

>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 297 HHYRQPNSYLNTFYNNKELRKRHILNNTTSPV 202
           ++Y    +Y N  YN K   K +I+N    PV
Sbjct: 98  YNYNNKYNYNNNNYNKKLYYKNYIINIEQIPV 129


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 748 SSGQ*PKKNGAENTLNCLKQLTSSHYEQFGH 840
           +SGQ    +G  ++L   K L SSH E  GH
Sbjct: 34  ASGQRSVSSGFRSSLRNYKTLISSHDELPGH 64


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 300 DHHYRQPNSYLNTFYNNKELRKRHILN 220
           ++ Y   N+Y N  YNN   +K    N
Sbjct: 88  NYKYSNYNNYNNNNYNNNNYKKLQYYN 114


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 300 DHHYRQPNSYLNTFYNNKELRKRHILN 220
           ++ Y   N+Y N  YNN   +K    N
Sbjct: 88  NYKYSNYNNYNNNNYNNNNYKKLQYYN 114


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 300 DHHYRQPNSYLNTFYNNKELRKRHILN 220
           ++ Y   N+Y N  YNN   +K    N
Sbjct: 88  NYKYSNYNNYNNNNYNNNNYKKLQYYN 114


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 300 DHHYRQPNSYLNTFYNNKELRKRHILN 220
           ++ Y   N+Y N  YNN   +K    N
Sbjct: 88  NYKYSNYNNYNNNNYNNNNYKKLQYYN 114


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 692 VDSHYEIL*FRHRFVSCD 745
           +DS+  +L  RHR V+CD
Sbjct: 48  MDSNEPLLPLRHRRVTCD 65


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 279 NSYLNTFYNNKELRKRHILNNTTSPVXA*IP 187
           N+Y N  YNN +    +I+N    PV   +P
Sbjct: 339 NNYNNNNYNNYKKLYYNIINIEQIPVPVPVP 369


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 748 SSGQ*PKKNGAENTLNCLKQLTSS 819
           ++GQ  K+NG E     LK+L S+
Sbjct: 536 AAGQPSKRNGGETNKQELKRLKST 559


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,291
Number of Sequences: 438
Number of extensions: 5218
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)