Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_C16
(890 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 27 0.23
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 25 0.70
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 25 0.70
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 25 0.70
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 25 0.70
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 25 0.70
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 25 0.93
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 25 0.93
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 25 0.93
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 25 0.93
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 25 0.93
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 24 1.6
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.8
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.8
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 23 3.7
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 4.9
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 4.9
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 4.9
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 22 8.6
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 27.1 bits (57), Expect = 0.23
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -1
Query: 653 AYVCR*GRCSNYIQIS 606
+Y CR GRCS+Y+Q+S
Sbjct: 50 SYACR-GRCSSYLQVS 64
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 25.4 bits (53), Expect = 0.70
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +2
Query: 170 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 292
+E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 205 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 25.4 bits (53), Expect = 0.70
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +2
Query: 170 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 292
+E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 194 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 234
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 25.4 bits (53), Expect = 0.70
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +2
Query: 170 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 292
+E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 210 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 250
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 25.4 bits (53), Expect = 0.70
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +2
Query: 170 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 292
+E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 205 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 25.4 bits (53), Expect = 0.70
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +2
Query: 170 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 292
+E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 205 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 25.0 bits (52), Expect = 0.93
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +2
Query: 170 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 292
+E +K+ N +RN +H SSR + + +R+ +++Y
Sbjct: 205 NESKKYATSSNSLRNRTHDFQHTSSRYSRERRCSRDRNREY 245
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.0 bits (52), Expect = 0.93
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +2
Query: 173 ELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 292
E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 195 ESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 234
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 0.93
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +2
Query: 173 ELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 292
E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 206 ESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 0.93
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +2
Query: 173 ELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 292
E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 206 ESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.0 bits (52), Expect = 0.93
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +2
Query: 173 ELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 292
E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 195 ESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 234
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +1
Query: 505 STVSFS*TFDSISSKQNCVFSASFLT 582
ST+ + T+DSI ++ + +F F+T
Sbjct: 161 STIDY--TYDSIEARDSAIFDGDFIT 184
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 2.8
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -3
Query: 780 PPNFCRSDCAPDLNTQSACLVRVF*HSR 697
PP F S C P+++ C+ + H++
Sbjct: 472 PPAFSHSRCPPEIHKSCICVRFIAEHTK 499
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 2.8
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -3
Query: 780 PPNFCRSDCAPDLNTQSACLVRVF*HSR 697
PP F S C P+++ C+ + H++
Sbjct: 472 PPAFSHSRCPPEIHKSCICVRFIAEHTK 499
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -2
Query: 856 SFKKKHCEKXCLNV*NVTSKMN*MISP 776
+F K+C LN+ + ++KM +++P
Sbjct: 105 NFANKYCGNITLNIESTSNKMTVILTP 131
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 521 LKLTVEFSSC*YQAESPGSGSSN 453
L+ T E+++ AES GSGS+N
Sbjct: 446 LRATKEYNTVPIIAESYGSGSTN 468
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 521 LKLTVEFSSC*YQAESPGSGSSN 453
L+ T E+++ AES GSGS+N
Sbjct: 446 LRATKEYNTVPIIAESYGSGSTN 468
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 521 LKLTVEFSSC*YQAESPGSGSSN 453
L+ T E+++ AES GSGS+N
Sbjct: 446 LRATKEYNTVPIIAESYGSGSTN 468
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 140 LQNQRTRTTKAKIINFCISIVS 75
+QN TR +K I N C + S
Sbjct: 22 IQNVHTRPSKEPICNICKRVYS 43
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,198
Number of Sequences: 438
Number of extensions: 4425
Number of successful extensions: 22
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -