Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_C13
         (878 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              26   0.53 
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    23   3.7  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    23   3.7  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    23   3.7  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   6.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   8.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   8.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   8.6  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = +1

Query: 61  KSDTINMYNVFSIHVQFLVLF-FAQASCQRFI--QPTIQATTDTAPD 192
           +S  ++ YN   I+VQF VL+ F    CQ  +  +PT Q   D   D
Sbjct: 687 RSADLSSYNCVPINVQFSVLYGFVIIECQEPVTNRPTGQLLLDYLTD 733


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 7/34 (20%), Positives = 19/34 (55%)
 Frame = -1

Query: 248 CHLDTAIAVPGQLVALYVLSGAVSVVACMVGWMN 147
           C +    ++   L+ +Y+ SG + +++ +  W+N
Sbjct: 212 CEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLN 245


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 7/34 (20%), Positives = 19/34 (55%)
 Frame = -1

Query: 248 CHLDTAIAVPGQLVALYVLSGAVSVVACMVGWMN 147
           C +    ++   L+ +Y+ SG + +++ +  W+N
Sbjct: 212 CEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLN 245


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 7/34 (20%), Positives = 19/34 (55%)
 Frame = -1

Query: 248 CHLDTAIAVPGQLVALYVLSGAVSVVACMVGWMN 147
           C +    ++   L+ +Y+ SG + +++ +  W+N
Sbjct: 151 CEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLN 184


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 421 DRPVKSNINCMMGRFN 374
           D  V+S + CMM +FN
Sbjct: 56  DENVQSYVECMMKKFN 71


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 13/51 (25%), Positives = 21/51 (41%)
 Frame = +1

Query: 442 GPAVLEPSRETASSNASSXLTPSQYILIWEIVTDDMHRTIKKNCGIIMSTF 594
           G       R T S  A++  T  Q+I   + ++    R   +  G+IM  F
Sbjct: 286 GGGTTSSRRTTGSRAAATTTTVYQFIEERQRISLSKERRAARTLGVIMGVF 336


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 13/51 (25%), Positives = 21/51 (41%)
 Frame = +1

Query: 442 GPAVLEPSRETASSNASSXLTPSQYILIWEIVTDDMHRTIKKNCGIIMSTF 594
           G       R T S  A++  T  Q+I   + ++    R   +  G+IM  F
Sbjct: 286 GGGTTSSRRTTGSRAAATTTTVYQFIEERQRISLSKERRAARTLGVIMGVF 336


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 13/51 (25%), Positives = 21/51 (41%)
 Frame = +1

Query: 442 GPAVLEPSRETASSNASSXLTPSQYILIWEIVTDDMHRTIKKNCGIIMSTF 594
           G       R T S  A++  T  Q+I   + ++    R   +  G+IM  F
Sbjct: 286 GGGTTSSRRTTGSRAAATTTTVYQFIEERQRISLSKERRAARTLGVIMGVF 336


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,687
Number of Sequences: 438
Number of extensions: 5053
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)