Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_P02
         (905 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   5.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   8.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   8.8  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
 Frame = +3

Query: 576 LPLVRVNWIQT**DTLMSLDKPQLECSEKNALFVKFGDAIALFVTIIXCNKQVNTTIAFI 755
           +P+     IQT    LM      + CS+K A +   G   AL    I      +  +  +
Sbjct: 410 IPVKSSEGIQTWDGVLMGQRLLTMSCSDKIARWNVLGVQGALLSYFIEPIYFHSIVLGSL 469

Query: 756 L--CFRFRGXCGRVFSALMNRPTP 821
           L     +R  CGR+ + +   P P
Sbjct: 470 LNPSHMYRAVCGRIENTIQGLPPP 493


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 59   SAHQVISTAPLVS*RPPLNLHKLTMNFAKIL 151
            SA  ++ T P     PP+NL    ++ ++IL
Sbjct: 994  SAELIVRTEPQRPAGPPINLEARALSSSEIL 1024


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 59   SAHQVISTAPLVS*RPPLNLHKLTMNFAKIL 151
            SA  ++ T P     PP+NL    ++ ++IL
Sbjct: 990  SAELIVRTEPQRPAGPPINLEARALSSSEIL 1020


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,543
Number of Sequences: 438
Number of extensions: 4128
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)