Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP21_F_C01
         (879 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    25   0.92 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.7  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   3.7  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   6.5  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   6.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.5  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   8.6  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = -1

Query: 297 RDDLSRMPGRIEVVGVFRRFF--LGALLT 217
           +D+L + P RI   G+FRRF+  LG L T
Sbjct: 538 KDELGK-PSRISKQGLFRRFYNLLGKLST 565


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 667 NYYMFNLSLRDTQWTVI 717
           NYY+FNL++ D  + ++
Sbjct: 69  NYYLFNLAVSDLLFLIL 85


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 28  NPLRFDFLSNKIQSNTVNATFPVVISCI*Y 117
           N L F   ++K + NT+  T P++I+ + Y
Sbjct: 80  NVLYFINKNDKYEENTILTTMPLLINVVKY 109


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 157 RMLLTYLRLAFGINIKYKKS 98
           RM+LT     F + IKY KS
Sbjct: 287 RMILTEAYTEFNLTIKYYKS 306


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/18 (38%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -3

Query: 418 RPPF-VWQLNSPSASHSC 368
           RP +  W+LN+ ++ H+C
Sbjct: 8   RPSYCTWELNATNSPHTC 25


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
 Frame = -2

Query: 617 EIRHWNGVTSKIYRLTAWLICGVVPF*IAASVSGRSRNFV*VKNALD-----VPSISETS 453
           E+RH   V +K Y     L  G+V F    +    S   V + N L+        +++  
Sbjct: 395 ELRHSRPVPAKKYDCVTLLFSGIVGFGAYCAAHTDSSGAVKIVNMLNQLYTAFDVLTDPK 454

Query: 452 IHPNTPRVSAIASSF 408
            +PN  +V  +   +
Sbjct: 455 KNPNVYKVETVGDKY 469


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 5/16 (31%), Positives = 12/16 (75%)
 Frame = -2

Query: 452 IHPNTPRVSAIASSFR 405
           IHP  PR+ ++ ++++
Sbjct: 160 IHPGDPRIKSVVTAYK 175


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,494
Number of Sequences: 438
Number of extensions: 4874
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)