Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_P22
         (941 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          23   4.0  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    23   4.0  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   7.0  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   7.0  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   9.3  

>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 854 VKRPRWWXFSIGPAPLTS 907
           +KR RWW     PA  TS
Sbjct: 40  IKRKRWWSRPREPAQTTS 57


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 898 GGGAYGKTPPTRPFYGF 848
           G   YG  PP + FY F
Sbjct: 68  GASGYGFVPPNQAFYRF 84


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 749 SGISSLKGGNTGFHXIRG 802
           SG  S K    GFH +RG
Sbjct: 247 SGSESFKRARMGFHGMRG 264


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 749 SGISSLKGGNTGFHXIRG 802
           SG  S K    GFH +RG
Sbjct: 247 SGSESFKRARMGFHGMRG 264


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +1

Query: 163 RQIGQNKEEP*ECQVQGSMLKVPVHPGHH 249
           R  G+  E+P  C + G    VP     H
Sbjct: 82  RSHGKEGEDPYRCNICGKTFAVPARLTRH 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,304
Number of Sequences: 438
Number of extensions: 3215
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30839445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)