Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_P12
         (921 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   3.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.0  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   3.0  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    22   6.8  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 298 RAHPRTGQL*GLEVHRWTPVQFEL 369
           R  P +  L  LEV RW P++  L
Sbjct: 112 RTEPLSPHLLNLEVERWRPLRSRL 135


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 338 YIVGRPFNLNCXL 376
           YI G PFN NC +
Sbjct: 676 YIGGNPFNCNCSM 688


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 51  LVHSFGFPLLLDFFKCV 101
           +V S G  LLLD F CV
Sbjct: 599 MVFSLGLFLLLDMFNCV 615


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +1

Query: 259 YECPKLVNDCSGHRAHPRTGQL*GLEVHRWTPV 357
           +EC K  N C  HR   R      L + +W+ +
Sbjct: 98  FECSKTSNPCLPHRNSDR-----DLNIRKWSSI 125


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,531
Number of Sequences: 438
Number of extensions: 3140
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)