Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_M11
         (1067 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   0.16 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   0.70 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    25   1.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   4.6  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   6.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   6.1  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    22   8.1  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 25.0 bits (52), Expect(2) = 0.16
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 531  QXXPPPPPPP 560
            Q  PPPPPPP
Sbjct: 1352 QQQPPPPPPP 1361



 Score = 25.0 bits (52), Expect = 1.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 531  QXXPPPPPPP 560
            Q  PPPPPPP
Sbjct: 1353 QQPPPPPPPP 1362



 Score = 21.0 bits (42), Expect(2) = 0.16
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +3

Query: 615  PPPPPP 632
            PPPPPP
Sbjct: 1357 PPPPPP 1362


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect(2) = 0.70
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 615  PPPPPPHXPD 644
            PPPPPP   D
Sbjct: 1859 PPPPPPRNHD 1868



 Score = 21.4 bits (43), Expect(2) = 0.70
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 525  SXQXXPPPPPP 557
            S    PPPPPP
Sbjct: 1854 SGSPEPPPPPP 1864


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = +3

Query: 543 PPPPPPXXRXXGRRPLXPSXPXXXPPPPPPH 635
           P PP P  R         + P   P P PPH
Sbjct: 109 PRPPHPRLRREPEAEPGNNRPVYIPQPRPPH 139



 Score = 25.0 bits (52), Expect = 1.2
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = +3

Query: 543 PPPPPPXXRXXGRRPLXPSXPXXXPPPPPPH 635
           P PP P  R         + P   P P PPH
Sbjct: 135 PRPPHPRLRREPEAEPGNNRPVYIPQPRPPH 165


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 220 PPPPXXGGEXT 188
           PPPP  GGE T
Sbjct: 377 PPPPIRGGEWT 387


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +3

Query: 594 PSXPXXXPPPPPPHXPD 644
           P  P   PPPP    PD
Sbjct: 338 PPKPAPPPPPPSSSGPD 354



 Score = 22.2 bits (45), Expect = 8.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 1000 PPXPRPPPXXP 1032
            PP P PPP  P
Sbjct: 338  PPKPAPPPPPP 348


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 12/35 (34%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
 Frame = +3

Query: 540 PPPPPPPXXRXXGRRPLXPSXPXXXPPPP-PPHXP 641
           P P P P       +   P  P   PPP  PP  P
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +3

Query: 579 RRPLXPSXPXXXPPPPPPHXPD 644
           R P     P   PP PPP+  D
Sbjct: 40  RDPRSNRGPVLFPPGPPPNNED 61


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,366
Number of Sequences: 438
Number of extensions: 5218
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 35668296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)