Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_L22
         (894 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   5.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   5.0  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   6.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   6.6  
AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.        22   6.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   8.7  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +1

Query: 52   GERICLKENKAFRELEE 102
            GE+I +  NKA++++EE
Sbjct: 1533 GEKIVVSRNKAYQKVEE 1549


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 212 SSAQLKPLSKYTKVRPFXNGVPQSHRYSTGVQSKLSVQEI 331
           SSA    ++KYT        +P     +  VQ+ + V EI
Sbjct: 786 SSAGTSSITKYTGCELTSESMPLQSALTAAVQTSVGVTEI 825


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 212 SSAQLKPLSKYTKVRPFXNGVPQSHRYSTGVQSKLSVQEI 331
           SSA    ++KYT        +P     +  VQ+ + V EI
Sbjct: 876 SSAGTSSITKYTGCELTSESMPLQSALTAAVQTSVGVTEI 915


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 145 LRRSTTYRTSVTCRLSTVAL 204
           LR S    TS  C+L+ VAL
Sbjct: 262 LRSSENQNTSAECKLAKVAL 281


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -1

Query: 318 ESLDCTPVEYRCDCGTPXLKGLTFVYFDSGFN 223
           E L+ T   +  +  TP     +F  FD G N
Sbjct: 24  EKLEWTKYPFGAEANTPGWVEESFTNFDKGIN 55


>AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.
          Length = 76

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 145 LRRSTTYRTSVTCRLSTVAL 204
           LR S    TS  C+L+ VAL
Sbjct: 12  LRSSENQNTSAECKLAKVAL 31


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +2

Query: 35  NSLKILEREFA*KKIKHFVSLKKWLLRI-FSEVLS 136
           NSL ++  +   KKI HF  L + L+   F  +L+
Sbjct: 229 NSLMVILPDLVGKKITHFFDLVRPLIAFKFHSILN 263


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,886
Number of Sequences: 438
Number of extensions: 3050
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)