Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_L07
         (915 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   5.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   8.9  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 12/52 (23%), Positives = 21/52 (40%)
 Frame = +1

Query: 106 IIFWCSMVSFGTLNAASQCGEIPITEWSGTESCRKQPLXSPIDXVVIQHTVS 261
           IIF       G + A  +C       W G++    + L S  +   ++ T+S
Sbjct: 346 IIFGSDQEVAGVMRAVKRCNATGAFSWIGSDGWSARGLVSDGNEAEVEGTLS 397


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 395 RVGTISVLQHCTTIIYPIGIGF 460
           +VG I V      I+ P G GF
Sbjct: 933 KVGCIQVTDETRKILEPFGFGF 954


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,115
Number of Sequences: 438
Number of extensions: 3323
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29750994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)