Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_F01
(1074 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 31 0.023
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 29 0.094
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 0.88
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 1.5
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 3.5
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 30.7 bits (66), Expect = 0.023
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 924 PXPXPPXPXPXPPXPXXPPPPPXPPPXXXSXPXPPPPXPPPPXXPS 1061
P P P P P P PP P PP PP PS
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPS 61
Score = 28.3 bits (60), Expect = 0.12
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = +3
Query: 924 PXPXP-PXPXPXPPXPXXPPPPPXPPPXXXSXPXPPPPXPPPPXXPSP 1064
P P P P P P PP P PP P PP P SP
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPG-GPPGAPPSQNPSQMMISP 67
Score = 24.6 bits (51), Expect = 1.5
Identities = 10/30 (33%), Positives = 11/30 (36%)
Frame = +1
Query: 751 PXXXXXSXPRPPPPXXXPPPXPXPPPXXPP 840
P P+ P P P PPP PP
Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGPP 52
Score = 23.0 bits (47), Expect = 4.7
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = +1
Query: 436 APXPXPPPPXXARXPLXPPXPSPQXLXPP 522
AP P P P + P P+P PP
Sbjct: 20 APGPQPSPHQSPQAPQRGSPPNPSQGPPP 48
Score = 23.0 bits (47), Expect = 4.7
Identities = 11/34 (32%), Positives = 12/34 (35%)
Frame = +2
Query: 521 PPPXGXPSPQPXTTXXPPXXXPPXPXGRPXXSXP 622
P P SPQ PP P G P + P
Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56
Score = 23.0 bits (47), Expect = 4.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 781 PPPPXXXPPPXPXPPPXXPP 840
PP P PPP PP PP
Sbjct: 39 PPNPSQGPPPGG--PPGAPP 56
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related protein
STG-1 protein.
Length = 397
Score = 28.7 bits (61), Expect = 0.094
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 1063 GEGXXGGGGXGGGGXGXEXXXGGGXGGGGGXXG 965
G G GG G G G GGGGG G
Sbjct: 21 GPGSSSAGGVVTGASGGSIVVGANNGGGGGGLG 53
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.4 bits (53), Expect = 0.88
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 957 PPXPXXPPPPP 989
PP P PPPPP
Sbjct: 338 PPKPAPPPPPP 348
Score = 25.4 bits (53), Expect = 0.88
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 958 PPXPXXPPPPP 990
PP P PPPPP
Sbjct: 338 PPKPAPPPPPP 348
Score = 23.8 bits (49), Expect = 2.7
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 1017 PXPPPPXPPPPXXPSP 1064
P P P PPPP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 23.0 bits (47), Expect = 4.7
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 936 PPXPXPXPPXPXXPPP 983
PP P P PP P P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 23.0 bits (47), Expect = 4.7
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 967 PXXPPPPPPXPPXS 1008
P P PPPP P S
Sbjct: 338 PPKPAPPPPPPSSS 351
Score = 22.6 bits (46), Expect = 6.2
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 975 PPPPPXPPPXXXSXP 1019
P P P PPP S P
Sbjct: 339 PKPAPPPPPPSSSGP 353
Score = 22.2 bits (45), Expect = 8.2
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 978 PPPPXPPPXXXSXPXP 1025
PP P PPP S P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 22.2 bits (45), Expect = 8.2
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 805 PPXPXPPPXXP 837
PP P PPP P
Sbjct: 338 PPKPAPPPPPP 348
Score = 22.2 bits (45), Expect = 8.2
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 966 PXXPPPPPXPP 998
P P PPP PP
Sbjct: 338 PPKPAPPPPPP 348
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 24.6 bits (51), Expect = 1.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 979 PPPPPXPPXS 1008
PPPPP PP S
Sbjct: 1355 PPPPPPPPSS 1364
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 975 PPPPPXPP 998
PPPPP PP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 978 PPPPXPPP 1001
PPPP PPP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 1023 PPPPXPPP 1046
PPPP PPP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 1026 PPPXPPPP 1049
PPP PPPP
Sbjct: 1355 PPPPPPPP 1362
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor protein.
Length = 168
Score = 23.4 bits (48), Expect = 3.5
Identities = 12/40 (30%), Positives = 12/40 (30%)
Frame = +3
Query: 945 PXPXPPXPXXPPPPPXPPPXXXSXPXPPPPXPPPPXXPSP 1064
P P PP P P P P P P P P
Sbjct: 107 PQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREP 146
Score = 23.0 bits (47), Expect = 4.7
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 8/55 (14%)
Frame = +3
Query: 924 PXPXPPXPX--------PXPPXPXXPPPPPXPPPXXXSXPXPPPPXPPPPXXPSP 1064
P P PP P P P P P P P P P P P P
Sbjct: 107 PQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQP 161
Score = 23.0 bits (47), Expect = 4.7
Identities = 12/34 (35%), Positives = 12/34 (35%), Gaps = 2/34 (5%)
Frame = +3
Query: 945 PXPXPPXPXXPPPPPXPPPXXXS--XPXPPPPXP 1040
P P PP P P P P P PP P
Sbjct: 133 PQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHP 166
Score = 22.6 bits (46), Expect = 6.2
Identities = 10/29 (34%), Positives = 11/29 (37%)
Frame = +1
Query: 439 PXPXPPPPXXARXPLXPPXPSPQXLXPPP 525
P P PP P R P P + P P
Sbjct: 107 PQPRPPHPRLRREPEAEPGNNRPVYIPQP 135
Score = 22.6 bits (46), Expect = 6.2
Identities = 10/29 (34%), Positives = 11/29 (37%)
Frame = +1
Query: 439 PXPXPPPPXXARXPLXPPXPSPQXLXPPP 525
P P PP P R P P + P P
Sbjct: 133 PQPRPPHPRLRREPEAEPGNNRPVYIPQP 161
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,479
Number of Sequences: 438
Number of extensions: 14820
Number of successful extensions: 84
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 35909298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -