Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_E18
(916 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 64 1e-10
SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 60 3e-09
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 52 5e-07
SB_15424| Best HMM Match : PAN (HMM E-Value=0.00016) 30 2.3
SB_47865| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_36789| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_30912| Best HMM Match : SEA (HMM E-Value=1.1) 29 4.0
SB_14194| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_40720| Best HMM Match : 7tm_3 (HMM E-Value=0) 29 6.9
SB_22405| Best HMM Match : SNF2_N (HMM E-Value=0) 28 9.2
SB_5493| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 64.5 bits (150), Expect = 1e-10
Identities = 43/209 (20%), Positives = 96/209 (45%), Gaps = 3/209 (1%)
Frame = +1
Query: 250 NVIASPLGVMLLLSLYESGAGAQSKEEIREILG-GGEAQESTHTYGLLNQRYAEFDPKFL 426
N+ SP +++ L++ GA + ++ + + E H + L + D +
Sbjct: 29 NLFYSPASIVVALAMTYLGARGNTATQMTKTFHFPTDVPEKFHDF-LQALNASNSDGNQI 87
Query: 427 TVANKIYVSDQYKLADAFSRTAN-LFRSEVDNINFSAPKNAA-DIINRWADEQTQGHIKT 600
+AN+++ +++ + F + + F +E+ +++ N A D +NRW +++T+ IK
Sbjct: 88 LMANRLFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKN 147
Query: 601 PVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDSTSMKKRSSRNRQCVSYSHCFT 780
+ E + T + + N ++F+G W FN + T+ + + + + S
Sbjct: 148 LIPEGMFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKFKTTPSQEIQVQFMYQSSEFRY 207
Query: 781 LKTKNWAQR*SXLPYKEPGFRMVVVLPDK 867
L++ + LPY MVV+LP++
Sbjct: 208 LESSTLGCQIVELPYAGEKLSMVVLLPNE 236
>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
Length = 363
Score = 59.7 bits (138), Expect = 3e-09
Identities = 49/219 (22%), Positives = 98/219 (44%), Gaps = 13/219 (5%)
Frame = +1
Query: 280 LLLSLYESGAGAQSKEEIREILGGGEAQ-ESTH-TYGLLNQRYAEFDPKF--LTVANKIY 447
+ L L G+ + +I I G E++ E TH T+ ++ D + + + NKI+
Sbjct: 3 MALGLVYLGSRGTTAIQIANIFGWKESEFEETHRTFKQFHEALLTSDLGYGEIQLVNKIW 62
Query: 448 VSDQYKLADAFSR-TANLFRSEVDNINF-SAPKNAADIINRWADEQTQGHIKTPVSEDKI 621
D++++ + F T + SE+ ++F + +A +N W +QT+G+IK + I
Sbjct: 63 GHDEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNIKELIPHGVI 122
Query: 622 DPATAVAMFNVIFFQGHWHVPFNASET-------EEKDSTSMKKRSSRNRQCVSYSHCFT 780
+ T + + N ++F+G W F T E + ++ + V++ +
Sbjct: 123 NSLTRLIIVNAVYFKGVWKKEFGEENTFHAAFFVPESHESKIEVEMMTRKMKVNFYYDAD 182
Query: 781 LKTKNWAQR*SXLPYKEPGFRMVVVLPDKXTDYLQCXKN 897
+K R LPY MV++LP++ + K+
Sbjct: 183 IKC-----RVVELPYSGDDTAMVIILPEEPSGIFSLEKS 216
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 52.4 bits (120), Expect = 5e-07
Identities = 28/150 (18%), Positives = 66/150 (44%), Gaps = 2/150 (1%)
Frame = +1
Query: 424 LTVANKIYVSDQYKLADAFSRTAN-LFRSEVDNINFSAP-KNAADIINRWADEQTQGHIK 597
+++AN +++ + + F+ + +++ +++ + A +N+W +E+T+ I
Sbjct: 50 MSIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKIC 109
Query: 598 TPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDSTSMKKRSSRNRQCVSYSHCF 777
++ + T + + N I+F+G W PF + + + S
Sbjct: 110 DLIAPGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEFRTTSSNEVEVEMMFQKSKFK 169
Query: 778 TLKTKNWAQR*SXLPYKEPGFRMVVVLPDK 867
L + + + LPY + MV+VLPD+
Sbjct: 170 YLHSDKYKCKLLELPYVDTQLSMVLVLPDE 199
>SB_15424| Best HMM Match : PAN (HMM E-Value=0.00016)
Length = 702
Score = 30.3 bits (65), Expect = 2.3
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Frame = +1
Query: 418 KFLTVANKIYVSDQYKLADAFSR-TANLFRSEVDNINFSAPKNAADIINRWADEQTQGHI 594
+FLT+ +K + D + L F+R T + S ++N + II A ++ HI
Sbjct: 268 RFLTLIDKHFPKDNH-LRKIFNRNTIKISYSCMNNTKQIIDNHNKRIITASAP-LSEPHI 325
Query: 595 KTPVSEDKIDPATAVAMFNVIFFQGHWHVPFNASETEEKDSTSMKKRSSRN 747
K P SE T+ ++F F+ PF + E S S R+ ++
Sbjct: 326 KLPFSEAHFQSPTSNSLFQRPTFRAPHQTPFFRAPLSEPHSQSPTFRAPQS 376
>SB_47865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1273
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -2
Query: 657 NDVKHCNGRGGVNFVFADRSLYVSLSLFVRPTVDDISGILRSAE 526
+D ++CN GVN V + + L +F T D+S + R E
Sbjct: 444 DDKQYCNNSHGVNIVVLEMLTFKVLHVFSYETSRDLSAVCRMVE 487
>SB_36789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 437 IKYTFPTSISWPTRSPEQRICSEAKWTTLTSALRRMPL 550
+ ++FP WP+ QR+ S W ++ + RR PL
Sbjct: 40 VYWSFPQLDPWPSVLAFQRVASHHSWPSVLACQRRGPL 77
>SB_30912| Best HMM Match : SEA (HMM E-Value=1.1)
Length = 354
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 249 ECDSVSSRRDAAAFLVRVWSRCTVQGRDKGNPWGR 353
E DSV + +D+ A W+R + + K NPW R
Sbjct: 262 EKDSVDTEKDSVATEKNPWTRRKIPWQRKKNPWTR 296
>SB_14194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 511 VDNINFSAPKNAADI--INRWADEQ-TQGHIKTPVSEDKIDPATAVAMFN 651
V ++ PK +A I + +W Q GH +TP S D + P A+ N
Sbjct: 1072 VTALHAKLPKGSASIDRVRKWVSSQPVGGHTQTPPSYDYLRPLLGAALVN 1121
>SB_40720| Best HMM Match : 7tm_3 (HMM E-Value=0)
Length = 768
Score = 28.7 bits (61), Expect = 6.9
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -1
Query: 439 YWRQSRISGRILRNADLIIRMCVLTLEPPLPQGFPLSLPWTVHRLQTRTRKAAASRREET 260
Y R+S ++ A R C+L+L + G S W VH++ T +K R++
Sbjct: 78 YGLDGRVSDKVF-TATCRARFCLLSLGFTIGFGAMFSKTWRVHQIFTNVKKVKKVVRDKD 136
Query: 259 L 257
L
Sbjct: 137 L 137
>SB_22405| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 764
Score = 28.3 bits (60), Expect = 9.2
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = -2
Query: 600 SLYVSLSLFVRPTVDDIS--GILRSAEVNVVHFASEQIRCSGERVGQLILVGN 448
SLY L L + P +D S I +S ++ V++ E+I C+GERV +LV N
Sbjct: 538 SLYDGL-LKLFPECNDASELSIAQSGKLTVLNSMLEEIHCTGERV---VLVSN 586
>SB_5493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 321 QGRDKGNPWGRGGSRVNTHIRIIKSALRRIRP 416
QGR K N +G +R N +R + + RR+RP
Sbjct: 7 QGRTKENKGEQGRTRENKELREVHADSRRLRP 38
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,185,271
Number of Sequences: 59808
Number of extensions: 605298
Number of successful extensions: 2509
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2507
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2645618622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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