Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_E08
(891 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 113 4e-24
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 82 2e-14
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 81 4e-14
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 74 4e-12
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 65 3e-09
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 65 3e-09
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 62 2e-08
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 61 4e-08
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 56 1e-06
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 52 1e-05
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 50 6e-05
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 49 2e-04
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 49 2e-04
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;... 48 3e-04
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 48 3e-04
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 47 6e-04
UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putati... 47 7e-04
UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, wh... 46 0.001
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 46 0.001
UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4; L... 44 0.007
UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2; Tric... 43 0.012
UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4; E... 41 0.037
UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;... 41 0.049
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ... 40 0.085
UniRef50_A7D4N6 Cluster: Binding-protein-dependent transport sys... 35 2.4
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 113 bits (273), Expect = 4e-24
Identities = 62/112 (55%), Positives = 68/112 (60%)
Frame = +1
Query: 139 MVSKAXXACVXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINVRDLI 318
M +KA ACV ++LILVD VAVTG +I+TILKAA V V PYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 319 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 474
TNIGSGV SDDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 82.2 bits (194), Expect = 2e-14
Identities = 43/63 (68%), Positives = 47/63 (74%)
Frame = +1
Query: 151 AXXACVXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINVRDLITNIG 330
A +C SALIL D VAVT +ISTI A V + PYWPGLF KALEGINV+DLITNIG
Sbjct: 15 AIASCAYSALILFDDDVAVTDEKISTI--QANVDIEPYWPGLFTKALEGINVKDLITNIG 72
Query: 331 SGV 339
SGV
Sbjct: 73 SGV 75
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 81.0 bits (191), Expect = 4e-14
Identities = 46/114 (40%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Frame = +1
Query: 139 MVSKAXXACVXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINVRDLI 318
M S + AC+ SALIL D V VT +I+ ++KAA V V P+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 319 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 474
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 74.1 bits (174), Expect = 4e-12
Identities = 43/56 (76%), Positives = 45/56 (80%)
Frame = +1
Query: 166 VXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINVRDLITNIGS 333
V SALILVD VAVT +ISTILKAA V PYW LFAKALEGINV+DLITNIGS
Sbjct: 36 VYSALILVDD-VAVTDEKISTILKAANVE--PYWRALFAKALEGINVKDLITNIGS 88
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 64.9 bits (151), Expect = 3e-09
Identities = 38/111 (34%), Positives = 49/111 (44%)
Frame = +1
Query: 142 VSKAXXACVXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINVRDLIT 321
+S + AC +ALIL D + +T IS ++K A V V YWP LFAK E N+ DLI
Sbjct: 1 MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIM 60
Query: 322 NIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 474
N+G+G S+DDM GLFD
Sbjct: 61 NVGAGGCGVARPVTTAAPTASQSVSIPEEKKNEMEVIKEESEDDMIIGLFD 111
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 64.9 bits (151), Expect = 3e-09
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +1
Query: 142 VSKAXXACVXSALILVDAAVAVTGAQISTILKAAAVA-VAPYWPGLFAKALEGINVRDLI 318
+S A A +ALIL D + +T ++ ++ AA V + P W LFAKALEG +V+DL+
Sbjct: 1 MSAAELASSYAALILADEGLEITADKLQALISAAKVPEIEPIWTSLFAKALEGKDVKDLL 60
Query: 319 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 474
N+GSG SDDDMGFGLFD
Sbjct: 61 LNVGSG--GGAAPAAGGAAAGGAAAVLDAPAEEKAEEEKEESDDDMGFGLFD 110
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 62.1 bits (144), Expect = 2e-08
Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Frame = +1
Query: 142 VSKAXXACVXSALILVDAAVAVTGAQISTILKAAAVA-VAPYWPGLFAKALEGINVRDLI 318
+SK+ ACV +AL+L D + VT +I+TILKAA + V Y P LFA +L G NV+DL+
Sbjct: 1 MSKSELACVYAALMLADDDIDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLL 60
Query: 319 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDD----MGFGLFD 474
++GS SDDD +GFGLFD
Sbjct: 61 MSMGSPAPSAAVTSAVPTAASATSAAAEKPKEAVKEEKKVVSDDDSDESIGFGLFD 116
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 60.9 bits (141), Expect = 4e-08
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +1
Query: 241 AAVAVAPYWPGLFAKALEGINVRDLITNIGSGV 339
A V + PYWP LFAKALEGINV+DLITNIGSGV
Sbjct: 6 ANVDIEPYWPALFAKALEGINVKDLITNIGSGV 38
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 56.0 bits (129), Expect = 1e-06
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = +1
Query: 163 CVXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINVRDLITNIGS 333
C +AL+L D V VT I I+ AA +V PY+PGLFA+AL NV D++ G+
Sbjct: 19 CSYAALVLSDGGVPVTSENIKKIISAAGGSVEPYFPGLFAQALSTTNVSDIVAGCGA 75
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = +1
Query: 160 ACVXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINVRDLITNIGS 333
ACV +A+IL D T A + +I AA V V W LFA LEG NV++L+T +GS
Sbjct: 7 ACVLAAIILADENQEPTAANLKSICDAAGVKVDSIWFTLFANYLEGKNVKELLTTLGS 64
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 50.4 bits (115), Expect = 6e-05
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +1
Query: 172 SALILVDAAVAVTGAQISTILKAAAVA-VAPYWPGLFAKALEGINVRDLITNIGS 333
+ALIL D A +T ++ +L AA + V P W LFAKALEG +V+D++T + S
Sbjct: 12 AALILADDATPITPEKLQVLLIAAGIEDVEPIWTTLFAKALEGKDVKDILTEVAS 66
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 48.8 bits (111), Expect = 2e-04
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +1
Query: 127 SXLKMVSKAXXACVXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINV 306
S L + CV S+L+L D + VT I ++KAA + P+ P LFA+AL+G ++
Sbjct: 7 SELTKEQREELMCVYSSLVLYDDGLDVTQDNILKLVKAAKGDMQPFTPMLFARALKGKDL 66
Query: 307 RDLITNIGSG 336
L++ +GSG
Sbjct: 67 GSLLSAVGSG 76
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 48.8 bits (111), Expect = 2e-04
Identities = 32/101 (31%), Positives = 43/101 (42%)
Frame = +1
Query: 172 SALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINVRDLITNIGSGVXXXX 351
+ALIL DA V +T ++ ++ A V V W LFAKALEG ++++ N +
Sbjct: 10 AALILADAEVEITSEKLLALVTKANVEVEGIWADLFAKALEGKDLKEFFFNFSAA----P 65
Query: 352 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 474
SDDDMGFGLFD
Sbjct: 66 AAAAAGGAAGGGAAAEEAAEEEKEEEAKEESDDDMGFGLFD 106
>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 103
Score = 48.0 bits (109), Expect = 3e-04
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +1
Query: 163 CVXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGI 300
C+ SA IL + V V +I+T +KAA + V P+WPGLFAK+L +
Sbjct: 22 CIYSAHILHNDKVMVMEDKINTPIKAAGINVEPFWPGLFAKSLNNV 67
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 48.0 bits (109), Expect = 3e-04
Identities = 30/101 (29%), Positives = 44/101 (43%)
Frame = +1
Query: 172 SALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINVRDLITNIGSGVXXXX 351
+A IL DA + +T + TI KAA V W ++AKALEG +++++++ +
Sbjct: 9 AAFILADAGLEITSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILSGFHNA---GP 65
Query: 352 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 474
SDDDMGFGLFD
Sbjct: 66 VAGAGAASGAAAAGGDAAAEEEKEEEAAEESDDDMGFGLFD 106
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 47.2 bits (107), Expect = 6e-04
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 160 ACVXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINVRDLITNIGS 333
A +AL++ +A +T I+T+L A + V +WP + AKAL N+ DLI + GS
Sbjct: 11 AVALAALLIHEAGKEITAEHINTVLHHANIKVEGFWPIIMAKALTNANIEDLIMDAGS 68
>UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putative;
n=7; Trypanosomatidae|Rep: 60S acidic ribosomal protein
P2, putative - Leishmania major
Length = 111
Score = 46.8 bits (106), Expect = 7e-04
Identities = 31/111 (27%), Positives = 44/111 (39%)
Frame = +1
Query: 142 VSKAXXACVXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINVRDLIT 321
+S AC +AL+L DA + + I+ +KAA V + P P +FA+ LE +V L+
Sbjct: 1 MSAETLACTYAALMLSDAGLPTSAENIAAAVKAAGVEMRPTLPIIFARFLEKKSVETLMA 60
Query: 322 NIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 474
+ DDDMGFGLFD
Sbjct: 61 AAAAQAPTAASAPSPAAGAASAAAAGGKVEDKKKDEPEEEGDDDMGFGLFD 111
>UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 46.4 bits (105), Expect = 0.001
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +1
Query: 160 ACVXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINVRDLI-TNIGS 333
AC +ALIL + + A+++ I+KAA + V P W +F KAL+G V DL+ N GS
Sbjct: 20 ACTYAALILYEDNQEINAAKLAQIIKAANLRVEPIWTKVFEKALKGKKVGDLLHGNSGS 78
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +1
Query: 148 KAXXACVXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINVRDLITNI 327
K C +ALIL + +++T I ++K + V PY P LF KAL+G ++ L++N+
Sbjct: 14 KQELLCTYAALILHEEKMSITNENIVKLIKKSNNTVLPYLPMLFEKALKGKDIEGLLSNL 73
Query: 328 GSG 336
G
Sbjct: 74 SVG 76
>UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4;
Leishmania|Rep: 60S acidic ribosomal protein P1 -
Leishmania peruviana
Length = 107
Score = 43.6 bits (98), Expect = 0.007
Identities = 31/105 (29%), Positives = 43/105 (40%)
Frame = +1
Query: 160 ACVXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINVRDLITNIGSGV 339
AC +AL+L DA + + I+ +KAA V+V P P +FA+ LE +V L+ +
Sbjct: 7 ACTYAALMLSDAGLPTSAENIAAAVKAAGVSVRPTMPIIFARFLEKKSVEALM----AAA 62
Query: 340 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 474
DDDMGFGLFD
Sbjct: 63 ATQAPTATSAAAAPAAGEASGKAEEKKKEEPEEEGDDDMGFGLFD 107
>UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 104
Score = 42.7 bits (96), Expect = 0.012
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +1
Query: 151 AXXACVXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINVRDLITNIG 330
A ACV +ALIL D + ++ ++ A+ + + +W L+A + NV DLI N+
Sbjct: 3 AELACVYAALILNDGEKEINADSLAKVVAASGLKLDQFWVNLYADYFKKANVADLIKNVS 62
Query: 331 SG 336
G
Sbjct: 63 LG 64
>UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Trypanosoma cruzi
Length = 109
Score = 41.1 bits (92), Expect = 0.037
Identities = 30/112 (26%), Positives = 44/112 (39%)
Frame = +1
Query: 139 MVSKAXXACVXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINVRDLI 318
M SK AC +ALIL D+ + + + KAA V V+ FA L+ +++ D++
Sbjct: 1 MSSKQQLACTYAALILADSGKTDMDSLLK-VTKAAGVDVSKGMASAFASILKNVDINDVL 59
Query: 319 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 474
+ + G DDDMGFGLFD
Sbjct: 60 SKVSFG--GVAPAAGGATAAPAAAAAAAAPAAAAAKKEEEEEDDDMGFGLFD 109
>UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;
n=8; Eukaryota|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 108
Score = 40.7 bits (91), Expect = 0.049
Identities = 32/111 (28%), Positives = 44/111 (39%)
Frame = +1
Query: 142 VSKAXXACVXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEGINVRDLIT 321
++ A AC +ALIL A+ I + KAA V V+ FA AL +NV +++
Sbjct: 1 MTTAQLACTYAALIL-SASGKTDADSICAVTKAAGVEVSHGMAAAFANALAAVNVNEVLG 59
Query: 322 NIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 474
+I G +DDDMGFGLFD
Sbjct: 60 SISFG--GAAAGGAAAPAAAAAASGAAPAAAAAKEEPEEDADDDMGFGLFD 108
>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
protein P1 fusion - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 39.9 bits (89), Expect = 0.085
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +1
Query: 148 KAXXACVXSALILVDAAVAVTGAQISTILKAAAVAVAPYWPGLFAKALEG 297
K A + +IL + +T I+ +L A+ + VAPYWP +FA+ ++G
Sbjct: 119 KQELAIMYCGMILNEVKADITEENINKLLSASKIEVAPYWPKMFAEIVKG 168
>UniRef50_A7D4N6 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Binding-protein-dependent
transport systems inner membrane component - Halorubrum
lacusprofundi ATCC 49239
Length = 339
Score = 35.1 bits (77), Expect = 2.4
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 199 VAVTGAQISTILKAAAVAVAPY-WPGLFAKALEGINVRD 312
V V G Q+ T++ A + A + WPGL ++ INVRD
Sbjct: 266 VTVLGLQLGTLIGGAVITEAVFSWPGLGTLVIDAINVRD 304
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,643,147
Number of Sequences: 1657284
Number of extensions: 7019738
Number of successful extensions: 22206
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 21346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22126
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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