Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_E07
(1221 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 35 0.11
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 35 0.15
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.61
SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.81
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 31 1.9
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 30 4.3
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 30 4.3
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 30 4.3
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.3
SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055) 29 5.7
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 29 7.5
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 35.1 bits (77), Expect = 0.11
Identities = 20/55 (36%), Positives = 22/55 (40%)
Frame = +1
Query: 442 PPQXGXXPFXPQKKXFXXGGPPPPPXFXKXKXXXGXXGGXPXPPPXGGGXXXXXP 606
PP G P P GGPPPPP + + G P PPP G G P
Sbjct: 356 PPVGGAAPPPPPPPPV--GGPPPPPPPIEGR-PPSSLGNPPPPPPPGRGAPPPGP 407
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -2
Query: 701 PPPXXGXKKXKKXXXXPXXXKKXPPPXXFXPXGXXXXXPPPXGGGXGXPPXXP 543
PPP G PPP P PPP G G PP P
Sbjct: 355 PPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPPPGRGAPPPGP 407
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 498 GAPSPPXFLXXKXXXGXXGGXPPPPPXXGGXXXXXP 605
GAP PP G PPPPP GG P
Sbjct: 344 GAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPP 379
Score = 29.5 bits (63), Expect = 5.7
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 499 GPPPPPXFXKXKXXXGXXGGXPXPPPXGGGXXXXXP 606
G PPPP G P PPP GG P
Sbjct: 344 GAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPP 379
Score = 28.7 bits (61), Expect = 9.9
Identities = 16/55 (29%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Frame = -2
Query: 701 PPPXXGXKKXKKXXXXPXXXKKXPPPXX--FXPXGXXXXXPPPXGGGXGXPPXXP 543
PPP P + PPP P PPP GG PP P
Sbjct: 315 PPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPP 369
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 34.7 bits (76), Expect = 0.15
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = +1
Query: 430 KXVXPPQXGXXPFXPQKKXFXXGGPPPPPXFXKXKXXXGXXGGXPXPPPXGGGXXXXXPX 609
K P+ G P P GG PPPP P PPP GGG P
Sbjct: 651 KEAATPEAGPPPPPPPPPGGQAGGAPPPPP-----PPLPGGAAPPPPPPIGGGAPPPPPP 705
Query: 610 G 612
G
Sbjct: 706 G 706
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 632 PPPXXFXPXGXXXXXPPPXGGGXGXPP 552
PPP P G PPP GGG PP
Sbjct: 677 PPPPPPLPGGAAPPPPPPIGGGAPPPP 703
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -2
Query: 632 PPPXXFXPXGXXXXXPPPXGGGXGXPPXXPXXXFXX*KXGGGGGPPXXKXFFWG 471
PPP G PPP GG PP P GGG PP F G
Sbjct: 665 PPPPGGQAGGAPPPPPPPLPGGAAPPPPPPI---------GGGAPPPPPPGFGG 709
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 32.7 bits (71), Expect = 0.61
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +1
Query: 442 PPQXGXXPFXPQKKXFXXGGPPPPPXFXKXKXXXGXXGGXPXPPPXGGGXXXXXP 606
PP G P P PPPPP G G P PPP GG P
Sbjct: 935 PPPGGSAPSQPPPPG-GNAPPPPPPPGGSAPPPGG--GAPPLPPPPGGSAPPPPP 986
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -2
Query: 653 PXXXKKXPPPXXFXPXGXXXXXPPPXGGGXGXPPXXPXXXFXX*KXGGGGGPP 495
P PPP P G PPP GG PP P GGG PP
Sbjct: 926 PGGNAPLPPPP---PGGSAPSQPPPPGGNAPPPPPPPGGSA---PPPGGGAPP 972
Score = 30.7 bits (66), Expect = 2.5
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Frame = -2
Query: 701 PPPXXGXKKXKKXXXXPXXXKKXPPPXXFXPX--GXXXXXPPPXGGGXGXPPXXP 543
PPP G + PPP P G PPP GG PP P
Sbjct: 934 PPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPP 988
Score = 30.3 bits (65), Expect = 3.3
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +1
Query: 445 PQXGXXPFXPQKKXFXXGGPPPPPXFXKXKXXXGXXGGXPXPPPXGGG 588
P G P P PPPPP G P PPP GG
Sbjct: 914 PPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGG 961
Score = 28.7 bits (61), Expect = 9.9
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +1
Query: 442 PPQXGXXPFXPQKKXFXXGGPPPPPXFXKXKXXXGXXGGXPXPPPXGGGXXXXXPXG 612
PP G P P PPPP GG PPP GG P G
Sbjct: 924 PPPGGNAPLPPPPPGGSAPSQPPPPG-GNAPPPPPPPGG-SAPPPGGGAPPLPPPPG 978
>SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1271
Score = 32.3 bits (70), Expect = 0.81
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Frame = +1
Query: 499 GPPPPPXFXKXKXXXGXXG-----GXPXPPPXGGGXXXXXPXG 612
GPP PP + K G G G P PP GGG P G
Sbjct: 1073 GPPGPPGYPGFKGYRGPQGPPGIAGEPGPPGIGGGIGYMGPPG 1115
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 31.5 bits (68), Expect = 1.4
Identities = 23/73 (31%), Positives = 25/73 (34%), Gaps = 10/73 (13%)
Frame = +1
Query: 442 PPQXGXXPFXPQKKXFXXGGPPPP---PXFXKXKXXXGXXGGXPXP-------PPXGGGX 591
PP G P GGPPPP + + G GG P P PP G G
Sbjct: 527 PPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQ 586
Query: 592 XXXXPXGKXFXGG 630
P G GG
Sbjct: 587 EGPPPPGAGQGGG 599
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +1
Query: 442 PPQXGXXPFXPQKKXFXXGGPPPPPXFXKXKXXXGXXGGXPXPPPXGGGXXXXXPXG 612
PP P GGPPPP + G G PPP G P G
Sbjct: 559 PPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPPGAGQGGGPPPPGAGQGWGLPPPG 615
Score = 29.5 bits (63), Expect = 5.7
Identities = 23/75 (30%), Positives = 25/75 (33%), Gaps = 11/75 (14%)
Frame = +1
Query: 442 PPQXGXXPFXPQKKXFXXGGPPPP---PXFXKXKXXXGXXGGXPXP--------PPXGGG 588
PP G P GGPPPP + + G GG P P PP G G
Sbjct: 494 PPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAG 553
Query: 589 XXXXXPXGKXFXGGG 633
P GGG
Sbjct: 554 QGWGQPPPGAGQGGG 568
Score = 28.7 bits (61), Expect = 9.9
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 3/50 (6%)
Frame = -2
Query: 611 PXGXXXXXPPPXGGGXGXPPXXPXXXFXX*KXG---GGGGPPXXKXFFWG 471
P PPP G G G PP G GGG PP WG
Sbjct: 561 PGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPPGAGQGGGPPPPGAGQGWG 610
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 442 PPQXGXXPFXPQKKXFXXGGPPPPPXFXKXKXXXGXXGGXPXPPP 576
PP G P P G PPPPP G G P PPP
Sbjct: 295 PPADGSAPAPPPPPP-PGGAPPPPP--PPPPPPPGDGGAPPPPPP 336
Score = 29.5 bits (63), Expect = 5.7
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -2
Query: 632 PPPXXFXPXGXXXXXPPPXGGGXGXPPXXPXXXFXX*KXGGGGGPP 495
PPP PPP GG PP P G GG PP
Sbjct: 292 PPPPPADGSAPAPPPPPPPGGAPPPPPPPPPP-----PPGDGGAPP 332
Score = 29.1 bits (62), Expect = 7.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 632 PPPXXFXPXGXXXXXPPPXGGGXGXPPXXP 543
PPP P PPP G G PP P
Sbjct: 307 PPPPGGAPPPPPPPPPPPPGDGGAPPPPPP 336
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 632 PPPXXFXPXGXXXXXPPPXGGGXGXPPXXP 543
PPP P PPP GG PP P
Sbjct: 308 PPPGGAPPPPPPPPPPPPGDGGAPPPPPPP 337
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.9 bits (64), Expect = 4.3
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +1
Query: 442 PPQXGXXPFXPQKKXFXXGGPPPPPXFXKXKXXXGXXGGXPXPPPXGGG 588
PP G P + G PPPP P PPP G G
Sbjct: 175 PPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPPPGRG 223
Score = 29.1 bits (62), Expect = 7.5
Identities = 19/69 (27%), Positives = 21/69 (30%)
Frame = -2
Query: 701 PPPXXGXKKXKKXXXXPXXXKKXPPPXXFXPXGXXXXXPPPXGGGXGXPPXXPXXXFXX* 522
PPP G ++ P P P P G PP G G P P
Sbjct: 216 PPPPPGRGPSQRSLAPPPTGSSRPLPAP--PPGENRPPPPMRGPTSGGEPPPPKNAPPPP 273
Query: 521 KXGGGGGPP 495
K G PP
Sbjct: 274 KRGSSNPPP 282
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 502 PPPPPXFXKXKXXXGXXGGXPXPPPXGGG 588
PPPP GG P PPP GGG
Sbjct: 197 PPPPGPGGIPPPPPPIRGGVPPPPPMGGG 225
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.9 bits (64), Expect = 4.3
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +1
Query: 442 PPQXGXXPFXPQKKXFXXGGPPPPPXFXKXKXXXGXXGGXPXPPPXGGG 588
PP G P + G PPPP P PPP G G
Sbjct: 87 PPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPPPGRG 135
Score = 29.1 bits (62), Expect = 7.5
Identities = 19/69 (27%), Positives = 21/69 (30%)
Frame = -2
Query: 701 PPPXXGXKKXKKXXXXPXXXKKXPPPXXFXPXGXXXXXPPPXGGGXGXPPXXPXXXFXX* 522
PPP G ++ P P P P G PP G G P P
Sbjct: 128 PPPPPGRGPSQRSLAPPPTGSSRPLPAP--PPGENRPPPPMRGPTSGGEPPPPKNAPPPP 185
Query: 521 KXGGGGGPP 495
K G PP
Sbjct: 186 KRGSSNPPP 194
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 502 PPPPPXFXKXKXXXGXXGGXPXPPPXGGGXXXXXP 606
PPPPP K G P PPP G P
Sbjct: 365 PPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPP 399
>SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055)
Length = 695
Score = 29.5 bits (63), Expect = 5.7
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 472 PQKKXFXXGGPPPPPXFXKXKXXXGXXGGXPXPPPXGGG 588
P K+ PPPPP G P PP GGG
Sbjct: 290 PLKRSVKKPLPPPPPQQAARIDYRASYGAPPLPPKRGGG 328
Score = 29.5 bits (63), Expect = 5.7
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 472 PQKKXFXXGGPPPPPXFXKXKXXXGXXGGXPXPPPXGGG 588
P K+ PPPPP G P PP GGG
Sbjct: 431 PLKRSVKKPLPPPPPQQAARINYRASYGAPPLPPKRGGG 469
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 29.1 bits (62), Expect = 7.5
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = -2
Query: 713 KKXXPPPXXGXKKXKKXXXXPXXXKKXPPPXXFXPXGXXXXXPPPXGGGXGXPPXXP 543
KK PPP P PPP PPP G G PP P
Sbjct: 674 KKVPPPPPPLPVIEGSSLSVPPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPP 730
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,269,778
Number of Sequences: 59808
Number of extensions: 299271
Number of successful extensions: 948
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 16,821,457
effective HSP length: 84
effective length of database: 11,797,585
effective search space used: 3798822370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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