Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_D21
         (872 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   4.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.6  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -3

Query: 609 ICLRFIIYYHNILKLHYIASLKYISAHVYLITLM 508
           IC  ++  YH      +   LKY    +Y++T++
Sbjct: 21  ICDSYLKIYHKEKYRKFCRILKYFIIAIYVLTIL 54


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +1

Query: 433  YVLDYIMQFLDYISNYYKEYHSHCLHQSDQV 525
            Y +  + Q+LD+I+    ++H H   Q+  V
Sbjct: 2496 YDVPALSQYLDWIAVMTYDFHGHWDKQTGHV 2526


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +2

Query: 413  NCIRHFYMYSITLCNSSIILVI 478
            NC+++  +Y +T+ +  ++LVI
Sbjct: 1000 NCLKYGVIYYVTVPSMYLLLVI 1021


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +2

Query: 413  NCIRHFYMYSITLCNSSIILVI 478
            NC+++  +Y +T+ +  ++LVI
Sbjct: 1000 NCLKYGVIYYVTVPSMYLLLVI 1021


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,132
Number of Sequences: 336
Number of extensions: 2641
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)