Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_D20
         (952 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F2E28C Cluster: PREDICTED: similar to high-mobil...    30   3.0  
UniRef50_Q6NMX2 Cluster: RE20733p; n=1; Drosophila melanogaster|...    27   3.4  
UniRef50_Q4X6Y4 Cluster: Putative uncharacterized protein; n=1; ...    34   4.6  
UniRef50_P48608 Cluster: Protein diaphanous; n=5; Endopterygota|...    28   6.4  
UniRef50_Q8GD27 Cluster: Adhesin FhaB; n=3; cellular organisms|R...    33   8.1  
UniRef50_A7QGU9 Cluster: Chromosome chr16 scaffold_94, whole gen...    33   8.1  
UniRef50_A5CDD8 Cluster: Putative uncharacterized protein; n=1; ...    28   9.2  

>UniRef50_UPI0000F2E28C Cluster: PREDICTED: similar to high-mobility
           group protein 2-like 1,; n=1; Monodelphis domestica|Rep:
           PREDICTED: similar to high-mobility group protein 2-like
           1, - Monodelphis domestica
          Length = 627

 Score = 29.9 bits (64), Expect(2) = 3.0
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -2

Query: 777 PPPPPPPPXXXXXXXXXXXXKKKK 706
           PPPPPPPP            KKKK
Sbjct: 394 PPPPPPPPPPVFHTDGQSEKKKKK 417



 Score = 23.8 bits (49), Expect(2) = 3.0
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = -2

Query: 816 PXPXXXKKXXXXXPPPPPPPP 754
           P P          P PPPPPP
Sbjct: 378 PFPGAVPPPPPPPPLPPPPPP 398


>UniRef50_Q6NMX2 Cluster: RE20733p; n=1; Drosophila
           melanogaster|Rep: RE20733p - Drosophila melanogaster
           (Fruit fly)
          Length = 145

 Score = 27.1 bits (57), Expect(2) = 3.4
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -2

Query: 816 PXPXXXKKXXXXXPPPPPPP 757
           P P    K     PPPPPPP
Sbjct: 31  PAPPAPVKSYIPPPPPPPPP 50



 Score = 26.6 bits (56), Expect(2) = 3.4
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -2

Query: 777 PPPPPPPP 754
           PPPPPPPP
Sbjct: 69  PPPPPPPP 76


>UniRef50_Q4X6Y4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 272

 Score = 34.3 bits (75), Expect = 4.6
 Identities = 21/53 (39%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
 Frame = +2

Query: 569 PPPPX----GXGGXGGPPPXFXXXXXXXXKKXPXXXFXXXXXPXKKKKXFFFF 715
           PPPP     G GG G PPP          KK     F     P KKK  F+FF
Sbjct: 188 PPPPKKKKRGGGGGGAPPPQ-----KKKKKKKKIFSFSLFPTPRKKKTYFYFF 235


>UniRef50_P48608 Cluster: Protein diaphanous; n=5;
           Endopterygota|Rep: Protein diaphanous - Drosophila
           melanogaster (Fruit fly)
          Length = 1091

 Score = 27.9 bits (59), Expect(2) = 6.4
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 609 GGPPXPPXPXGGGG 568
           GGPP PP P G GG
Sbjct: 552 GGPPPPPPPPGMGG 565



 Score = 24.6 bits (51), Expect(2) = 6.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 612 GGGPPXPPXP 583
           GGGPP PP P
Sbjct: 536 GGGPPPPPPP 545


>UniRef50_Q8GD27 Cluster: Adhesin FhaB; n=3; cellular organisms|Rep:
            Adhesin FhaB - Bordetella avium
          Length = 2621

 Score = 33.5 bits (73), Expect = 8.1
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -1

Query: 832  KKXXXPPPXXXKKXXXXXPPPPPPP 758
            KK   PPP    K     PPPPPPP
Sbjct: 2338 KKVDPPPPPPPPKVKKVDPPPPPPP 2362


>UniRef50_A7QGU9 Cluster: Chromosome chr16 scaffold_94, whole genome
           shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
           chr16 scaffold_94, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 341

 Score = 33.5 bits (73), Expect = 8.1
 Identities = 16/47 (34%), Positives = 17/47 (36%)
 Frame = -1

Query: 817 PPPXXXKKXXXXXPPPPPPPXXXXXXXXXXXXKXKKKKXFFFFXGXP 677
           PPP          PPPPPPP            + K  K   FF G P
Sbjct: 54  PPPPPPPPPPPPPPPPPPPPPVKLIASIPFTWEEKPGKPLPFFSGTP 100


>UniRef50_A5CDD8 Cluster: Putative uncharacterized protein; n=1;
           Orientia tsutsugamushi Boryong|Rep: Putative
           uncharacterized protein - Orientia tsutsugamushi (strain
           Boryong) (Rickettsia tsutsugamushi)
          Length = 276

 Score = 28.3 bits (60), Expect(2) = 9.2
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 777 PPPPPPPPXXXXXXXXXXXXKKKK 706
           PPPPPPPP            KKK+
Sbjct: 128 PPPPPPPPFQAQKERSETSSKKKQ 151



 Score = 23.8 bits (49), Expect(2) = 9.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 798 KKXXXXXPPPPPPPP 754
           K+     PPP PPPP
Sbjct: 115 KQTQNIIPPPSPPPP 129


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,240,895
Number of Sequences: 1657284
Number of extensions: 11011721
Number of successful extensions: 188265
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81559
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 87774035305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)