Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_D10
(893 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 73 1e-11
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 63 1e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 45 0.003
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 43 0.012
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.037
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.086
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 36 1.8
UniRef50_Q2GNZ2 Cluster: Putative uncharacterized protein; n=6; ... 35 3.2
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.6
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 72.5 bits (170), Expect = 1e-11
Identities = 40/59 (67%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Frame = -2
Query: 604 RGAEPMEKRPATRPFYGSW--PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 434
RGAEPMEKR W P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 4 RGAEPMEKR------LRCWLLPVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 62.9 bits (146), Expect = 1e-08
Identities = 47/115 (40%), Positives = 56/115 (48%)
Frame = +2
Query: 371 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 550
R +C G +PLPRSLTR ARSFGCGERY+LT + R K RP
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD------GDGNFLEDTRKTLSKEEIRP 79
Query: 551 GTVKRXRCWAFFHRLRPPGRASQKSTLKSEVAKPDRDYKDTRRFPPGKLPSCALL 715
+R R F P + KS + + +DYKD RRFP PSCALL
Sbjct: 80 ---RRSR----FSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPL-VAPSCALL 126
Score = 33.1 bits (72), Expect = 9.8
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +1
Query: 601 PWTSITKIDAQVRGGETRQGL*RYQAFP 684
P TSI K DAQ+ GGETRQ + FP
Sbjct: 90 PLTSIAKSDAQISGGETRQDYKDPRRFP 117
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 347 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 514
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 44.8 bits (101), Expect = 0.003
Identities = 41/97 (42%), Positives = 47/97 (48%)
Frame = +1
Query: 601 PWTSITKIDAQVRGGETRQGL*RYQAFPPWKAPLVRSPVXDPXRLPXYLXRLFSPSGKRG 780
P TSITKIDAQVRGGETRQ + F P +AP + + P RLP R
Sbjct: 22 PLTSITKIDAQVRGGETRQDYKDTRRF-PLEAPSC-ALLFRPCRLPDTCPPFSLREAWR- 78
Query: 781 AFLIXHAVRYLXSGVGRFXSNLGWVHXPPGSTPTAXP 891
FLI HAV + F + PP S PTA P
Sbjct: 79 -FLIAHAVG-ISVRCRSFAPSWAVCTNPPFS-PTAAP 112
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 466 HSKAVIRLSTESGDNAGKNM 525
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 42.7 bits (96), Expect = 0.012
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 149 DPDMIRYIDEFGQTTTXMQ 205
DPDMIRYIDEFGQTTT MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.1 bits (92), Expect = 0.037
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3
Query: 273 INKLTTTIAFILCFRFRGEVWEVFSALMNRPTRGERRFAYW 395
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.086
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 417 ERGSGRAPNTQTASPRALADSLMQ 346
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 35.5 bits (78), Expect = 1.8
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +1
Query: 601 PWTSITKIDAQVRGGETRQGL*RYQAFP 684
P TSITK DAQ+ GGETRQ + FP
Sbjct: 58 PLTSITKSDAQISGGETRQDYKDTRRFP 85
>UniRef50_Q2GNZ2 Cluster: Putative uncharacterized protein; n=6;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 2182
Score = 34.7 bits (76), Expect = 3.2
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = -3
Query: 642 TSDLSVDFCDARPGGRSLWKNAQQRXLFTVPGLLLAFCSHVLSCVIP 502
+ D+ VDF + G+ LW+NA++ +F + LA + V+SCV+P
Sbjct: 1800 SQDVLVDFVSKQSHGKMLWENARESGIF----MWLADNAAVVSCVVP 1842
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.6
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 556 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 434
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,226,245
Number of Sequences: 1657284
Number of extensions: 14343826
Number of successful extensions: 34353
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 33110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34339
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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