Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_D10
(893 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g01650.1 68415.m00091 zinc finger (C2H2 type) family protein ... 32 0.59
At1g24220.1 68414.m03054 paired amphipathic helix repeat-contain... 29 3.1
At5g45050.2 68418.m05524 disease resistance protein-related simi... 29 5.5
At5g45050.1 68418.m05523 disease resistance protein-related simi... 29 5.5
At3g25500.1 68416.m03171 formin homology 2 domain-containing pro... 28 7.3
At3g20830.1 68416.m02634 protein kinase family protein contains ... 28 7.3
At2g04135.1 68415.m00397 hypothetical protein 28 7.3
At1g79670.2 68414.m09292 wall-associated kinase, putative simila... 28 9.6
At1g79670.1 68414.m09291 wall-associated kinase, putative simila... 28 9.6
>At2g01650.1 68415.m00091 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 458
Score = 31.9 bits (69), Expect = 0.59
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +3
Query: 495 RIRG*RRKEHVSKRPAKGQEP*KGRVAGRFSIGSAPLDEHHKNRRSSQRWRNPTGTIKIP 674
+++G +K ++S + G+ +GRV G S SAP +NR +S + NPT K P
Sbjct: 7 KLKGFMKKVNLSS--SSGKFKGQGRVLGSSSSSSAPPVNPIQNRFNSSQAPNPTPRPK-P 63
Query: 675 GVSPLESSPRALS 713
+PL P + S
Sbjct: 64 NPNPLPEKPLSSS 76
>At1g24220.1 68414.m03054 paired amphipathic helix repeat-containing
protein weak similarity to transcription co-repressor
Sin3 [Xenopus laevis] GI:4960210; contains Pfam profile
PF02671: Paired amphipathic helix repeat
Length = 744
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -2
Query: 505 PLILWITVLPPLSELIPLAAAERPXXXXXXXXXXXXXQYANRLSPRVGRFI--NAEKTSH 332
P+ L IT++PP + + A++P + N+L P+ R I AEK +H
Sbjct: 264 PVKLKITIIPPKARRTIPSEADKPTHTDELN-------FMNKLPPKRRRTIPSEAEKPTH 316
Query: 331 TSPLNLKHKM 302
T LN +K+
Sbjct: 317 TDELNFMNKL 326
>At5g45050.2 68418.m05524 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1344
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 404 PLPRSLTRCARSFGCGERYQLTQRR 478
P PRS RCA S GC R Q+ + R
Sbjct: 1169 PYPRSYYRCASSKGCFARKQVERSR 1193
>At5g45050.1 68418.m05523 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1372
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 404 PLPRSLTRCARSFGCGERYQLTQRR 478
P PRS RCA S GC R Q+ + R
Sbjct: 1197 PYPRSYYRCASSKGCFARKQVERSR 1221
>At3g25500.1 68416.m03171 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 1051
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 585 SIGSAPLDEHHKNRRSSQRWRNPTGTIKIPGVSPLESSPRALSC 716
SIG ++ + R SQ R P + +PG +P + +SC
Sbjct: 243 SIGEEDEEDEFYSPRGSQSGREPLNRVGLPGQNPRSVNNDTISC 286
>At3g20830.1 68416.m02634 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 408
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 395 PIRKPPLPARWPIH*CRKNLPHL 327
P PP P R P H CRKN P +
Sbjct: 384 PSSAPPSPLRSPPHVCRKNDPFI 406
>At2g04135.1 68415.m00397 hypothetical protein
Length = 285
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 546 GQEP*KGRVAGRFSIGSAPLDEHHKNRRSSQRWRNPTGTIKI 671
G++ +GR GR G H KN S ++W N G ++
Sbjct: 185 GRDRGRGRGRGRGYTGGRGSGVHFKNSNSHKKWENKDGNKQV 226
>At1g79670.2 68414.m09292 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 714
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 827 VXSPPTWAGCTNPPVQPRPLXL 892
+ SP T +GC+ PV+P PL L
Sbjct: 105 IKSPVTSSGCSQRPVKPLPLNL 126
>At1g79670.1 68414.m09291 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 751
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 827 VXSPPTWAGCTNPPVQPRPLXL 892
+ SP T +GC+ PV+P PL L
Sbjct: 105 IKSPVTSSGCSQRPVKPLPLNL 126
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,518,820
Number of Sequences: 28952
Number of extensions: 312346
Number of successful extensions: 733
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2100696768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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