Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_D07
         (1025 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    26   0.54 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.9  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   6.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   8.8  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 25.8 bits (54), Expect = 0.54
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 165 DKXCFICEICDAIALFVTIISCNKQVN 245
           DK C +C+  + I  F+ II C  Q N
Sbjct: 521 DKLCDVCDSVNRIFGFIIIIGCLIQFN 547


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 602 QVPGWATPP 628
           +VPGW TPP
Sbjct: 3   EVPGWLTPP 11


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = +2

Query: 542 LAFXHXPPXPLXXHSHXSTPQVPGWATPP 628
           L   + PP P+  H +      P +  PP
Sbjct: 158 LPLHYPPPPPVYTHHYARYHPYPNFGVPP 186


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 161 CIXVVVCPNSSMYH*SCLESKL 96
           C    VC +   YH SC E+ +
Sbjct: 572 CAAYYVCRSGLSYHLSCAENMM 593


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,091
Number of Sequences: 336
Number of extensions: 1440
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 29176451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)