Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_D06
         (917 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_20867| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   7.0  
SB_58820| Best HMM Match : DUF1014 (HMM E-Value=6.4)                   28   9.2  
SB_6643| Best HMM Match : Antimicrobial_8 (HMM E-Value=0.27)           28   9.2  
SB_57887| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.2  

>SB_20867| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 564

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +1

Query: 340 SQEIWNSRIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIAII 516
           S+++W SR+      + A+ ++K+FY+   F        Y  +Y+   + L AY + II
Sbjct: 38  SKKLWLSRLRPGLDGDRALLIYKVFYFFY-FAAIGSLQPYFGLYLKHSVQLPAYLVGII 95


>SB_58820| Best HMM Match : DUF1014 (HMM E-Value=6.4)
          Length = 238

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 19/82 (23%), Positives = 34/82 (41%)
 Frame = +2

Query: 566 YPQYFVNMEVKNKMDYVKMMDGCLERENML*LRNYQRKRTIRNVRQLFQFPXLTPTTKTE 745
           + Q  +  E + +    K +D  L +EN        R   + N+++ F FP +TPT    
Sbjct: 62  HEQMHLMQESRQRQKEKKTIDD-LAKENTQINGVRNRNHDLLNLKKKFSFPYVTPTQVNI 120

Query: 746 XAYLTEDVGLNAYYYYFHSHLP 811
              +   +   + YY +   LP
Sbjct: 121 PKIMKRSLSYESEYYTWTFGLP 142


>SB_6643| Best HMM Match : Antimicrobial_8 (HMM E-Value=0.27)
          Length = 251

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 375 KNEGRSHRAVQAVLLCQRF*MFLQNSMLRQSL 470
           K+ GR+HRA   VL+ Q   M ++  ++ QSL
Sbjct: 211 KHHGRAHRAGDEVLVLQMMVMSIKMKLINQSL 242


>SB_57887| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 542

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +1

Query: 493 YAYYIAIIQRSDTASFVLPGSIRSLSSIFCQHGS*K 600
           ++ YI + Q SD+ S   P +I  L SIF +HGS K
Sbjct: 163 FSRYIEVPQLSDSQSS--PVTINPLKSIFARHGSLK 196


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,713,541
Number of Sequences: 59808
Number of extensions: 405897
Number of successful extensions: 1399
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1398
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2657535823
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)