Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_D04
         (910 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    24   1.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.5  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   2.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   2.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   5.8  

>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 630 CKITMIPCFFSNSWLLE 580
           CK T+ P  FS  WLL+
Sbjct: 8   CKCTICPKAFSRPWLLQ 24


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 443 EYQWKVDAGYHL 478
           +YQ +VD+GYHL
Sbjct: 135 KYQLEVDSGYHL 146


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 443 EYQWKVDAGYHL 478
           +YQ +VD+GYHL
Sbjct: 135 KYQLEVDSGYHL 146


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 443 EYQWKVDAGYHL 478
           +YQ +VD+GYHL
Sbjct: 135 KYQLEVDSGYHL 146


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/15 (60%), Positives = 13/15 (86%), Gaps = 1/15 (6%)
 Frame = -1

Query: 475 MITCINFPL-ILDPG 434
           +++CINFPL +LD G
Sbjct: 648 VVSCINFPLGVLDRG 662


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
 Frame = +3

Query: 123 GEPEYETDEK*VP*NQTLNQHSTWL--WQILGEFEAMKEYKAYRC 251
           GE  + T     P N   N+HS W   W   G  +A    K   C
Sbjct: 339 GEDLFRTMANAAPGNSASNRHSAWQSHWLNKGAEQAKNVLKCVWC 383


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 360 KETSGLXLWDMLSCAFWVVKLL 425
           KE S L L+ +    FWV+KLL
Sbjct: 355 KELSYLILFSIGFNCFWVMKLL 376


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,153
Number of Sequences: 336
Number of extensions: 4708
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)