Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_D01
         (923 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g63980.1 68418.m08033 3'(2'),5'-bisphosphate nucleotidase / i...    30   1.9  
At4g29160.2 68417.m04173 SNF7 family protein contains Pfam domai...    30   2.5  
At4g29160.1 68417.m04172 SNF7 family protein contains Pfam domai...    30   2.5  
At4g12460.1 68417.m01971 oxysterol-binding family protein simila...    29   5.8  
At2g19390.1 68415.m02262 expressed protein                             29   5.8  
At1g25480.1 68414.m03164 expressed protein contains Pfam profile...    28   7.6  

>At5g63980.1 68418.m08033 3'(2'),5'-bisphosphate nucleotidase /
           inositol polyphosphate 1-phosphatase / FIERY1 protein
           (FRY1) (SAL1) identical to SP|Q42546
           3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)
           (3'(2'),5- bisphosphonucleoside 3'(2')-phosphohydrolase)
           (DPNPase) {Arabidopsis thaliana}; identical to cDNA
           inositol polyphosphate 1-phosphatase FIERY1 (FRY1)
           GI:15281147
          Length = 353

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
 Frame = +1

Query: 208 ITTADYNTAVSLILLLEKQSSGS----IIEDTVNNLIRDGNRNVLEFAYKL 348
           +T ADY +   + L+LEK+ S      + E+   +L +DG+++ LE   KL
Sbjct: 42  VTVADYGSQAVVSLVLEKELSSEPFSLVAEEDSGDLRKDGSQDTLERITKL 92


>At4g29160.2 68417.m04173 SNF7 family protein contains Pfam domain,
           PF03357: SNF7 family
          Length = 192

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/64 (25%), Positives = 35/64 (54%)
 Frame = +2

Query: 362 VRKSSNTTSLXQFRQVLSESNVKIINKRDNLAIKLGAAADSDNDRIAYGDANDKSSENVS 541
           ++K++N   + +    ++E    +   ++ LA  +GAAAD D D +A  + ++  SE + 
Sbjct: 86  MQKATNIDDVDKTMDEINEQTENMKQIQEALATPMGAAADFDEDELA-AELDELESEELE 144

Query: 542 WKLI 553
            +L+
Sbjct: 145 SQLL 148


>At4g29160.1 68417.m04172 SNF7 family protein contains Pfam domain,
           PF03357: SNF7 family
          Length = 219

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/64 (25%), Positives = 35/64 (54%)
 Frame = +2

Query: 362 VRKSSNTTSLXQFRQVLSESNVKIINKRDNLAIKLGAAADSDNDRIAYGDANDKSSENVS 541
           ++K++N   + +    ++E    +   ++ LA  +GAAAD D D +A  + ++  SE + 
Sbjct: 113 MQKATNIDDVDKTMDEINEQTENMKQIQEALATPMGAAADFDEDELA-AELDELESEELE 171

Query: 542 WKLI 553
            +L+
Sbjct: 172 SQLL 175


>At4g12460.1 68417.m01971 oxysterol-binding family protein similar
           to SP|P22059 Oxysterol-binding protein 1 {Homo sapiens};
           contains Pfam profiles PF00169: PH domain, PF01237:
           Oxysterol-binding protein
          Length = 694

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 563 ENNRVYFKIYSVRRHQYLKLGTGTDGENDHSVYGDDRAD 679
           E + ++  +Y +R H+Y  LG G   E   S   DD+ +
Sbjct: 238 EASGIHDDVYQLRNHKYSSLGRGKYSECSTSASSDDKQE 276


>At2g19390.1 68415.m02262 expressed protein
          Length = 1211

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
 Frame = +2

Query: 419 SNVKIINKRDNLAIKLGAAADSDNDRIAYGDANDKSSENVSWKLIPLWENNRVYFKIYSV 598
           +   +++ R+N  ++  AA D D + +  G+ N    E+ +   I  WE +++  K  S+
Sbjct: 213 TRTSMMDVRNNCIVRQSAAVDKDKEIMRVGNHNAVQGEDRTSTGIDGWETSKMKKKRSSI 272

Query: 599 RR--HQYLKLGTGTDGEND 649
               H  L      DG  D
Sbjct: 273 NADCHPNLASNKVVDGYRD 291


>At1g25480.1 68414.m03164 expressed protein contains Pfam profile
           PF01027: Uncharacterized protein family UPF0005
          Length = 548

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -1

Query: 662 HKRYGRFHHPYPFQVSSIGAYEHC 591
           H  Y  FHHP+   V   GA  HC
Sbjct: 305 HGPYKTFHHPWANYVKLSGAVRHC 328


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,799,910
Number of Sequences: 28952
Number of extensions: 325191
Number of successful extensions: 981
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2197951248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)