Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C11
         (1016 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.8  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   5.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   6.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   8.7  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +1

Query: 553 PRXCLNWRASPXXPQXXNXRRKNEPQIHVSKNISNTPRP 669
           P   ++   SP  P   N   +NE     S  IS+TP P
Sbjct: 124 PSGVISTNTSPPSPILSNRFGENEEADAASNVISSTPLP 162


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 670 MGGACLKCFSKHESGVHSFF 611
           M   C+KC  K +  VH  F
Sbjct: 66  MKNGCVKCEQKQKEDVHKVF 85


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 319 FRGVXWVGYGDRKGL 363
           +RG  WVG+ D + L
Sbjct: 825 YRGNQWVGFDDERSL 839


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
            protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 1013 GSWLDATGGHSPXSKFESE 957
            GSWLD +GG    + + ++
Sbjct: 196  GSWLDMSGGMHQMANYSTD 214


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 263 CFPRGXCFPLDSLGKGPRPSGALXGSGM 346
           C P+G  F    L  G     A+ G+GM
Sbjct: 42  CSPQGASFGSSMLNSGMPGGMAMNGNGM 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,468
Number of Sequences: 336
Number of extensions: 4304
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 28867160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)