Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C09
         (921 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   1.1  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    24   1.9  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 16/51 (31%), Positives = 21/51 (41%)
 Frame = +1

Query: 196 NGRAGL*ESRSHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVRESEC**NC 348
           NG+A    SR H F+   G      C CD   +   K  +   E +C  NC
Sbjct: 752 NGQAYFPGSRFHPFLIPTGFDSCTVCTCDAKYL-EIKCKRIYNEKQCCKNC 801


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 206 PDCENPEVTISLTTWAHATYHSASATGLMS 295
           P+CENPE  + ++T          A G  S
Sbjct: 14  PECENPETELLVSTKRSTISQGCKACGYHS 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,564
Number of Sequences: 336
Number of extensions: 2677
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25754817
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)