Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_C08
(1253 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 2.1
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 30 2.8
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 30 2.8
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 30 3.7
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 30 3.7
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 30 3.7
At5g19810.1 68418.m02354 proline-rich extensin-like family prote... 29 4.8
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 29 4.8
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 29 6.4
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 29 6.4
At1g10620.1 68414.m01204 protein kinase family protein contains ... 29 6.4
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 29 8.5
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 30.7 bits (66), Expect = 2.1
Identities = 34/169 (20%), Positives = 41/169 (24%)
Frame = +3
Query: 615 PVXXTAXHPPGXHPTXRXXXPTXXPLPXPXLHPXPPPXXXTLALTHPAXPXXTMXSXXXX 794
PV PP P P P P P P PPP P P +
Sbjct: 434 PVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPP-----PPPPVYSPPPPSPP 488
Query: 795 XXXXXXXXXVIXPXAXXXPPRNAXXPQRAXRXVGRXXXHXPXXAXXTXPQPXPXXAXLPQ 974
P PP + P P T P P P + P
Sbjct: 489 PPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHS--PP 546
Query: 975 PPKVXCPXXXXXXXALXRPSQLXXPXNXHXXXSRXXPXRHPRXXPXXSP 1121
PP+ P + P P + P +P P P
Sbjct: 547 PPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPPPIYPYLSPPPPP 595
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 637 TPPAPIPXXAXPXP-PXXPCRXPXCTXXXPHXXARSXSPT 753
TPPAP+P + P P P P P + P SPT
Sbjct: 73 TPPAPVPPVSPPPPTPSVPSPTPPVSPPPPTPTPSVPSPT 112
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 30.3 bits (65), Expect = 2.8
Identities = 30/119 (25%), Positives = 32/119 (26%), Gaps = 4/119 (3%)
Frame = +3
Query: 639 PPGXHPTXRXXX---PTXXPLPXPXLHPXPPPXXXTLALTHPAXPXXTMXSXXXXXXXXX 809
PPG P P P P P P PPP + PA P T
Sbjct: 25 PPGPSPCPSPPPKPQPKPPPAPSPSPCPSPPPKPQPKPVPPPACPP-TPPKPQPKPAPPP 83
Query: 810 XXXXVIXPXAXXXP-PRNAXXPQRAXRXVGRXXXHXPXXAXXTXPQPXPXXAXLPQPPK 983
P P P P + V H P P P P P PPK
Sbjct: 84 EPKPAPPPAPKPVPCPSPPKPPAPTPKPV---PPHGPPPKPAPAPTPAPSPKPAPSPPK 139
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/66 (28%), Positives = 22/66 (33%)
Frame = +3
Query: 567 PPXPXLSXVXXRWXANPVXXTAXHPPGXHPTXRXXXPTXXPLPXPXLHPXPPPXXXTLAL 746
PP P +N + PP P PT P P P PPP T A
Sbjct: 730 PPPPPPPPAPPTPQSNGISAMKSSPPA--PPAPPRLPTHSASPPPPTAPPPPPLGQTRAP 787
Query: 747 THPAXP 764
+ P P
Sbjct: 788 SAPPPP 793
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 642 PGXHPTXRXXXPTXXPLPXPXLHPXPPP 725
P HP P P P P HP PPP
Sbjct: 40 PPHHPPPPHFSPPHQPPPSPYPHPHPPP 67
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 29.9 bits (64), Expect = 3.7
Identities = 28/125 (22%), Positives = 31/125 (24%), Gaps = 1/125 (0%)
Frame = +3
Query: 609 ANPVXXTAXHPPGXHPTXRXXXPTXXPL-PXPXLHPXPPPXXXTLALTHPAXPXXTMXSX 785
A P A P P P P+ P P + P PP + PA P
Sbjct: 44 AAPPTTAAPPPTTTTPPVSAAQPPASPVTPPPAVTPTSPPAPKVAPVISPATPPPQPPQS 103
Query: 786 XXXXXXXXXXXXVIXPXAXXXPPRNAXXPQRAXRXVGRXXXHXPXXAXXTXPQPXPXXAX 965
V P A PP P A P P P
Sbjct: 104 PPASAPTVSPPPVSPPPAPTSPPPTPASPPPAPASPPPAPASPPPAPVSPPPVQAPSPIS 163
Query: 966 LPQPP 980
LP P
Sbjct: 164 LPPAP 168
>At5g19810.1 68418.m02354 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 249
Score = 29.5 bits (63), Expect = 4.8
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Frame = +2
Query: 614 PCPXXCXXPPRXPSHXXPXXXHPRSLAXXXAAPXPXPTXXHARXHPPXXSSXHHALXXTR 793
P P PP P P++ A P P P + R +PP A R
Sbjct: 162 PPPTVTRPPPPPTITRSPPPPRPQAAAYYKKTP-PPPPYKYGRVYPPPPPPPQAARSYKR 220
Query: 794 -PXLDPPSAHG 823
P PPS +G
Sbjct: 221 SPPPPPPSKYG 231
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 29.5 bits (63), Expect = 4.8
Identities = 35/179 (19%), Positives = 44/179 (24%), Gaps = 2/179 (1%)
Frame = +2
Query: 614 PCPXXCXXPPRXPSHXXPXXXHPRSLAXXXAAPXPXPTXXHARXHPPXXSSXHHALXXTR 793
P P P P + P + + P P P +A PP ++
Sbjct: 587 PSPREYYPSPSPPYYQYTSSPPPPTYYATQSPPPPPPPTYYAVQSPPPPPPVYYPPVTAS 646
Query: 794 PXLDPPSAHGDPTXXXPXSXXXCXAXPTXXPXRGXS--XXPXAXXRXXXXXTTPSXXXXX 967
P PP + P P + T P P P
Sbjct: 647 P--PPPPVYYTPVIQSPPPPPVYYSPVTQSPPPPPPVYYPPVTQSPPPSPVYYPPVTQSP 704
Query: 968 PTTPKSXXPXAXXXXXXXRXALPAXXXREPPPXXISXXPXETSPXXPGXLTPXXXXXPA 1144
P P P P PPP + P SP P TP PA
Sbjct: 705 PPPPVYYLPVTQSPPPPSPVYYPPVAKSPPPPSPVYYPPVTQSPPPPS--TPVEYHPPA 761
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/53 (30%), Positives = 19/53 (35%)
Frame = +3
Query: 567 PPXPXLSXVXXRWXANPVXXTAXHPPGXHPTXRXXXPTXXPLPXPXLHPXPPP 725
PP P + + P PP P PT P P P + P PPP
Sbjct: 68 PPPPYIPCPPPPYTPKPPTVKPPPPPYVKPPP---PPTVKPPPPPYVKPPPPP 117
Score = 28.7 bits (61), Expect = 8.5
Identities = 16/53 (30%), Positives = 19/53 (35%)
Frame = +3
Query: 567 PPXPXLSXVXXRWXANPVXXTAXHPPGXHPTXRXXXPTXXPLPXPXLHPXPPP 725
PP P + + P T PP P PT P P + P PPP
Sbjct: 98 PPPPTVKPPPPPYVKPPPPPTVKPPPPPTP-YTPPPPTPYTPPPPTVKPPPPP 149
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +1
Query: 643 PAPIPXXAXPXPPXXPCRXPXCTXXXPHXXARSXSPTXXXLXSP 774
P P P P PP PC P P + SP L P
Sbjct: 54 PEPEPADCPPPPPPPPCPPPPSPPPCPPPPSPPPSPPPPQLPPP 97
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +3
Query: 612 NPVXXTAXHPPGXHPTXRXXXPTXXPLPXPXLHPXPPP 725
+P TA PP P PT P P + P P P
Sbjct: 59 SPPPATAAQPPPNQPPNTTPPPTPPSSPPPSITPPPSP 96
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 28.7 bits (61), Expect = 8.5
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 564 APPXPXLSXVXXRWXANPVXXTAXHPPGXHPTXRXXXPTXXPLPXPXLHPXPPP 725
AP P P A PP PT P P P P P P P
Sbjct: 69 APTPPKPKPAPAPTPPKPKPKPAPTPPNPKPTPAPTPPKPKPAPAPAPTPAPKP 122
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,156,362
Number of Sequences: 28952
Number of extensions: 172289
Number of successful extensions: 1000
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,070,560
effective HSP length: 83
effective length of database: 9,667,544
effective search space used: 3228959696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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