Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_C04
         (910 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7P684 Cluster: Chromosome chr4 scaffold_6, whole genom...    35   3.3  
UniRef50_Q8XJ61 Cluster: Putative uncharacterized protein CPE190...    33   7.6  
UniRef50_Q54HE0 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  
UniRef50_Q0TWB9 Cluster: Predicted protein; n=1; Phaeosphaeria n...    33   7.6  

>UniRef50_A7P684 Cluster: Chromosome chr4 scaffold_6, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr4 scaffold_6, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 70

 Score = 34.7 bits (76), Expect = 3.3
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = +3

Query: 207 SWALLLYQTQRKAKARYTQYTLTLTIIELEKGVYEVRF 320
           +W L L  TQ+  KA    +TL L+  EL+KG+Y++RF
Sbjct: 4   TWLLRLIDTQKLRKA----HTLALSFSELKKGIYQLRF 37


>UniRef50_Q8XJ61 Cluster: Putative uncharacterized protein CPE1900;
           n=2; Clostridium perfringens|Rep: Putative
           uncharacterized protein CPE1900 - Clostridium
           perfringens
          Length = 125

 Score = 33.5 bits (73), Expect = 7.6
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +2

Query: 647 VTLDIEVXKVKXTMEKXDFNLKIDYVRLLKSSAIEDDALFLLVNNDLVVIKSTGILKVVE 826
           V L  E+       EK D  + ID VRL++ +   ++  F + + DL+V K    LK+ E
Sbjct: 5   VKLQKEITNDLGDKEKLDLLIAIDNVRLIQYTCPSNE-FFSVSHKDLIVYKENNTLKISE 63

Query: 827 N 829
           N
Sbjct: 64  N 64


>UniRef50_Q54HE0 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 898

 Score = 33.5 bits (73), Expect = 7.6
 Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
 Frame = +2

Query: 554 KSLKNXXKYVWDDXLKAVNXVMFDNFNVLHYVTLDIEVXKVKXTMEKXDFNLKIDYVRLL 733
           KS  N       D     N  + ++FNV+HY +  ++V  +  ++       +     L 
Sbjct: 45  KSNNNNNNIFEGDNSHIYNQFLGEDFNVVHYTSNALKVSSISLSLNTLTSCTRELGQELT 104

Query: 734 KSSAIEDDALFLLVNNDLVVIKSTGILKV-VENLGESV 844
           ++     D LF L NN   + + T  LK+ V NL ES+
Sbjct: 105 ENITTNYDDLFKLANNIKELDQLTDTLKLGVSNLEESI 142


>UniRef50_Q0TWB9 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 305

 Score = 33.5 bits (73), Expect = 7.6
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -3

Query: 194 SNIAPTLRCLKTEPLATLEAATLKSHQQR*EGVAA 90
           SNI PT RCL   PL T +   LK H  R  G ++
Sbjct: 134 SNIVPTTRCLSPFPLDTPQLQKLKKHYHRQTGTSS 168


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,956,276
Number of Sequences: 1657284
Number of extensions: 12628504
Number of successful extensions: 24623
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24622
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82801539422
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)