Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_B24
         (942 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6G7Y4 Cluster: Putative uncharacterized protein; n=1; ...    35   2.6  
UniRef50_A2EG41 Cluster: Uncharacterized Cys-rich domain contain...    35   2.6  
UniRef50_UPI0000EB29DF Cluster: UPI0000EB29DF related cluster; n...    34   6.0  
UniRef50_Q9VJD7 Cluster: CG6639-PA; n=1; Drosophila melanogaster...    34   6.0  
UniRef50_A7EUK1 Cluster: Putative uncharacterized protein; n=1; ...    33   8.0  

>UniRef50_A6G7Y4 Cluster: Putative uncharacterized protein; n=1;
           Plesiocystis pacifica SIR-1|Rep: Putative
           uncharacterized protein - Plesiocystis pacifica SIR-1
          Length = 245

 Score = 35.1 bits (77), Expect = 2.6
 Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
 Frame = +1

Query: 208 PNPFFAQPTVGNGYEPIDNRPYIVN--PPKDYNPN-GNGYEPIDNGAYYVD--PPPFPG 369
           P P    P++  G  PID  P I    PP D  P+   G  PID G   +D  PPP  G
Sbjct: 101 PPPIDGGPSIDGGPPPIDGGPSIDGGPPPIDGGPSIDGGPPPIDGGPPPIDGGPPPIDG 159


>UniRef50_A2EG41 Cluster: Uncharacterized Cys-rich domain containing
           protein; n=3; Trichomonas vaginalis G3|Rep:
           Uncharacterized Cys-rich domain containing protein -
           Trichomonas vaginalis G3
          Length = 228

 Score = 35.1 bits (77), Expect = 2.6
 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = +1

Query: 208 PNPFFAQPTVGNGYEPIDNRPYIVNPPKDY-NPNGNGYEPIDNGAYYVDPPPFP 366
           P P    P    GY P   + Y   PP++Y  P   GY P     Y V PPP P
Sbjct: 152 PPPQGYAPPPPQGYAPPPPQEYAPPPPQEYAPPPPQGYAPPPPQGYAVPPPPPP 205


>UniRef50_UPI0000EB29DF Cluster: UPI0000EB29DF related cluster; n=1;
           Canis lupus familiaris|Rep: UPI0000EB29DF UniRef100
           entry - Canis familiaris
          Length = 217

 Score = 33.9 bits (74), Expect = 6.0
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
 Frame = +1

Query: 205 TPNPFFAQPTVGNGYEPIDNRPYIVN--PPKDYNPNGNGYEPIDNGAYYVDPPPFP-GAR 375
           TP P    PT  +G E     P+++   PP+   P G G  P   G +  +P P P GA 
Sbjct: 9   TPPPPGGSPTCASGPEAPPGAPHLLRCAPPRGQGPRGQG--PRGQGLWPGEPTPLPRGAE 66

Query: 376 G 378
           G
Sbjct: 67  G 67


>UniRef50_Q9VJD7 Cluster: CG6639-PA; n=1; Drosophila
           melanogaster|Rep: CG6639-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 494

 Score = 33.9 bits (74), Expect = 6.0
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = +1

Query: 235 VGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPPFPGARGG 381
           V NG  P++N  Y  N    Y  N  GY P++NG Y V+   +P   GG
Sbjct: 136 VNNGGYPVNNGGYPSNNG-GYPSNNGGY-PVNNGGYPVNNGGYPANNGG 182


>UniRef50_A7EUK1 Cluster: Putative uncharacterized protein; n=1;
            Sclerotinia sclerotiorum 1980|Rep: Putative
            uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 2000

 Score = 33.5 bits (73), Expect = 8.0
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 238  GNGYEPIDNRPYIVNPPKDYN-PNGNGYEPIDNGAYYVDPPPF 363
            G+GYEP  +  Y    P  YN P GN YEP  +  Y  +PP +
Sbjct: 1683 GSGYEPPSSTGY--ETPTGYNTPTGNSYEPPSSTGY--EPPSY 1721


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,253,350
Number of Sequences: 1657284
Number of extensions: 9744592
Number of successful extensions: 21409
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21340
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86549281324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)